RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ING3Q9NXR8 418 aa6.23□□□□□ -1.41
COPS3-209ENST00000486810 ODF2LQ9ULJ1 636 aa6.23□□□□□ -1.41
COPS3-209ENST00000486810 A0A1W2PR48 441 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 SHTN1A0MZ66 631 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 WDHD1O75717 1129 aaPredicted RBP6.22□□□□□ -1.41
COPS3-209ENST00000486810 IGHDP01880 384 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 VSIG10L2P0DP72 767 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 ENPP1P22413 925 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 KIR2DL3P43628 341 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 GPR3P46089 330 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 GPR15P49685 360 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 SCAND1P57086 179 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 PTPROQ16827 1216 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 TBC1D25Q3MII6 688 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 ELOA2Q8IYF1 753 aaPredicted RBP6.22□□□□□ -1.41
COPS3-209ENST00000486810 RPUSD2Q8IZ73 545 aaKnown RBP6.22□□□□□ -1.41
COPS3-209ENST00000486810 UNC5BQ8IZJ1 945 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 VPS37AQ8NEZ2 397 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 PLA2G3Q9NZ20 509 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 TMOD4Q9NZQ9 345 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 CPSF2Q9P2I0 782 aaKnown RBP6.22□□□□□ -1.41
COPS3-209ENST00000486810 KLHL42Q9P2K6 505 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 CDY2AQ9Y6F7 541 aa6.22□□□□□ -1.41
COPS3-209ENST00000486810 GOLGA8AA7E2F4 631 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 GOLGA8BA8MQT2 603 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 K7ESF4 209 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 TMEM127O75204 238 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 FSBPO95073 299 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 CPEP16870 476 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 CYP2C19P33261 490 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 RPS19P39019 145 aaKnown RBP6.21□□□□□ -1.42
COPS3-209ENST00000486810 PRPHP41219 470 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 HNRNPH2P55795 449 aaKnown RBP6.21□□□□□ -1.42
COPS3-209ENST00000486810 MGAT5Q09328 741 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 GRIK3Q13003 919 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 UGT8Q16880 541 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 GAGE13Q4V321 117 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 TTLL5Q6EMB2 1281 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 KCNK18Q7Z418 384 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 C11orf96Q7Z7L8 435 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 CCDC191Q8NCU4 936 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 CHST13Q8NET6 341 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 OR14C36Q8NHC7 312 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 TSPEARQ8WU66 669 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 CCDC47Q96A33 483 aaKnown RBP6.21□□□□□ -1.42
COPS3-209ENST00000486810 TMEM176AQ96HP8 235 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 TRIM7Q9C029 511 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 INO80BQ9C086 356 aaPredicted RBP6.21□□□□□ -1.42
COPS3-209ENST00000486810 KLC2Q9H0B6 622 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 ENKD1Q9H0I2 346 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 NELFAQ9H3P2 528 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 MSL2Q9HCI7 577 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 HOXC10Q9NYD6 342 aa6.21□□□□□ -1.42
COPS3-209ENST00000486810 HECAQ9UBI9 543 aaPredicted RBP6.21□□□□□ -1.42
COPS3-209ENST00000486810 SCAPERQ9BY12 1400 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 F8VZ95 297 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 DAPK3O43293 454 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 CFBP00751 764 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 CCDC159P0C7I6 412 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 MSX2P35548 267 aaPredicted RBP6.2□□□□□ -1.42
COPS3-209ENST00000486810 RPS6KA3P51812 740 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 EVA1CP58658 441 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 GRM7Q14831 915 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 E2F5Q15329 346 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 MAN2A1Q16706 1144 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.2□□□□□ -1.42
COPS3-209ENST00000486810 MAMDC4Q6UXC1 1216 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 POLNQ7Z5Q5 900 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 CBARPQ8N350 705 aaPredicted RBP6.2□□□□□ -1.42
COPS3-209ENST00000486810 TTC30BQ8N4P2 665 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 C1orf131Q8NDD1 294 aaKnown RBP6.2□□□□□ -1.42
COPS3-209ENST00000486810 RSAD2Q8WXG1 361 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 AHCYL2Q96HN2 611 aaKnown RBP6.2□□□□□ -1.42
COPS3-209ENST00000486810 FAXDC2Q96IV6 333 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 PLEKHG4BQ96PX9 1271 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 UIMC1Q96RL1 719 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 QRSL1Q9H0R6 528 aaKnown RBP6.2□□□□□ -1.42
COPS3-209ENST00000486810 C14orf93Q9H972 538 aaKnown RBP6.2□□□□□ -1.42
COPS3-209ENST00000486810 IFT122Q9HBG6 1241 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 DPP7Q9UHL4 492 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 USP25Q9UHP3 1055 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 MCM8Q9UJA3 840 aa6.2□□□□□ -1.42
COPS3-209ENST00000486810 UBE2QL1A1L167 161 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 ERICH4A6NGS2 130 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 MTSS1O43312 755 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 ADRB1P08588 477 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 TGFB3P10600 412 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 HARSP12081 509 aaKnown RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 TNNT1P13805 278 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 COMTP21964 271 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 ATICP31939 592 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 SELENOPP49908 381 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 ZNF132P52740 706 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 RBM6P78332 1123 aaKnown RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 DEUP1Q05D60 604 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 RBBP5Q15291 538 aaKnown RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 CCDC70Q6NSX1 233 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 ABHD15Q6UXT9 468 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 LEKR1Q6ZMV7 388 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms