RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 TLR9Q9NR96 1032 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 TBC1D7Q9P0N9 293 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 CNTN3Q9P232 1028 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 ANKRD63C9JTQ0 380 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 NRP1O14786 923 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 NCK2O43639 380 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 ADSSP30520 456 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 KCNA1Q09470 495 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 SNW1Q13573 536 aaKnown RBP19.41■□□□□ 0.7
SREBF1-213ENST00000485080 SLC10A6Q3KNW5 377 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 GRAMD1CQ8IYS0 662 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 ZNF507Q8TCN5 953 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 CCDC34Q96HJ3 373 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 UBE4BO95155 1302 aa19.41■□□□□ 0.7
SREBF1-213ENST00000485080 SMIM28A0A1B0GU29 152 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 TTC26A0AVF1 554 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 NT5C1B-RDH14C9J2C7 533 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 MEFVO15553 781 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-213ENST00000485080 GARTP22102 1010 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 CASP1P29466 404 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 ERVFC1P60507 584 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 SNRPFP62306 86 aaKnown RBP19.4■□□□□ 0.7
SREBF1-213ENST00000485080 FAM160A1Q05DH4 1040 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 PSMD2Q13200 908 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 BMT2Q1RMZ1 405 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 CLEC17AQ6ZS10 378 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 BCL7CQ8WUZ0 217 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-213ENST00000485080 PPP2R3CQ969Q6 453 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 TIGD1Q96MW7 591 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 MSTO1Q9BUK6 570 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 COLEC11Q9BWP8 271 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 CXCL16Q9H2A7 254 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 SLC38A7Q9NVC3 462 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 MARCH5Q9NX47 278 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 IRAK3Q9Y616 596 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 ATG2AQ2TAZ0 1938 aa19.4■□□□□ 0.7
SREBF1-213ENST00000485080 PRPF6O94906 941 aaKnown RBP19.39■□□□□ 0.69
SREBF1-213ENST00000485080 HARSP12081 509 aaKnown RBP19.39■□□□□ 0.69
SREBF1-213ENST00000485080 HOXD13P35453 343 aa19.39■□□□□ 0.69
SREBF1-213ENST00000485080 IRS1P35568 1242 aa19.39■□□□□ 0.69
SREBF1-213ENST00000485080 MATR3P43243 847 aaKnown RBP eCLIP19.39■□□□□ 0.69
SREBF1-213ENST00000485080 OSTNP61366 133 aa19.39■□□□□ 0.69
SREBF1-213ENST00000485080 ELOA2Q8IYF1 753 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-213ENST00000485080 GPR65Q8IYL9 337 aa19.39■□□□□ 0.69
SREBF1-213ENST00000485080 RNF168Q8IYW5 571 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-213ENST00000485080 HPS3Q969F9 1004 aa19.39■□□□□ 0.69
SREBF1-213ENST00000485080 UROC1Q96N76 676 aa19.39■□□□□ 0.69
SREBF1-213ENST00000485080 IPO9Q96P70 1041 aaKnown RBP19.39■□□□□ 0.69
SREBF1-213ENST00000485080 CPSF3Q9UKF6 684 aaKnown RBP19.39■□□□□ 0.69
SREBF1-213ENST00000485080 AGO2Q9UKV8 859 aaKnown RBP19.39■□□□□ 0.69
SREBF1-213ENST00000485080 FSD2A1L4K1 749 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 TMEM189-UBE2V1I3L0A0 370 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 KIAA0391O15091 583 aaKnown RBP19.38■□□□□ 0.69
SREBF1-213ENST00000485080 OR1G1P47890 313 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 DPYDQ12882 1025 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 BMS1Q14692 1282 aaKnown RBP19.38■□□□□ 0.69
SREBF1-213ENST00000485080 CCDC85BQ15834 202 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-213ENST00000485080 ENOX2Q16206 610 aaKnown RBP19.38■□□□□ 0.69
SREBF1-213ENST00000485080 TCEAL5Q5H9L2 206 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 CD302Q8IX05 232 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 SYCP3Q8IZU3 236 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 MICALL1Q8N3F8 863 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 GLIS3Q8NEA6 775 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 SCFD1Q8WVM8 642 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 ZMAT2Q96NC0 199 aaKnown RBP19.38■□□□□ 0.69
SREBF1-213ENST00000485080 VN1R3Q9BXE9 311 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 ZBP1Q9H171 429 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 TSHZ2Q9NRE2 1034 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 COG5Q9UP83 839 aa19.38■□□□□ 0.69
SREBF1-213ENST00000485080 NCOR1O75376 2440 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 VCANP13611 3396 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 TISP43B9A030 160 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 CTSAP10619 480 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 HSP90AA2PQ14568 343 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-213ENST00000485080 KCNB1Q14721 858 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 ZBTB6Q15916 424 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 CTC1Q2NKJ3 1217 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 KMT5BQ4FZB7 885 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 VPS52Q8N1B4 723 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 MRPL43Q8N983 215 aaKnown RBP19.37■□□□□ 0.69
SREBF1-213ENST00000485080 POMGNT1Q8WZA1 660 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 DDX27Q96GQ7 796 aaKnown RBP19.37■□□□□ 0.69
SREBF1-213ENST00000485080 CDCA3Q99618 268 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-213ENST00000485080 TCF25Q9BQ70 676 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 IKZF4Q9H2S9 585 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 RPF1Q9H9Y2 349 aaKnown RBP19.37■□□□□ 0.69
SREBF1-213ENST00000485080 EXOC1Q9NV70 894 aa19.37■□□□□ 0.69
SREBF1-213ENST00000485080 CGNQ9P2M7 1197 aaKnown RBP19.37■□□□□ 0.69
SREBF1-213ENST00000485080 PRG3Q9Y2Y8 225 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-213ENST00000485080 TTC28Q96AY4 2481 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-213ENST00000485080 RHOBTB3O94955 611 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 LDHAP00338 332 aaKnown RBP19.36■□□□□ 0.69
SREBF1-213ENST00000485080 SOD2P04179 222 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 RPN1P04843 607 aaKnown RBP19.36■□□□□ 0.69
SREBF1-213ENST00000485080 CXCL8P10145 99 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 RPL9P32969 192 aaKnown RBP19.36■□□□□ 0.69
SREBF1-213ENST00000485080 TNFSF9P41273 254 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 SMC1AQ14683 1233 aaKnown RBP19.36■□□□□ 0.69
SREBF1-213ENST00000485080 UPP1Q16831 310 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms