RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	CACNA1B	Q00975	2339 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	SHISA7	A6NL88	538 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	CCL16	O15467	120 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	DGAT1	O75907	488 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	NPTXR	O95502	500 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	GLRA2	P23416	452 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	PSMA5	P28066	241 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	CTTN	Q14247	550 aa	Known RBP	13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	ZNF852	Q6ZMS4	543 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	ZNF274	Q96GC6	653 aa	Predicted RBP	13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	KXD1	Q9BQD3	176 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	ANKEF1	Q9NU02	776 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	GDE1	Q9NZC3	331 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	DNMT3B	Q9UBC3	853 aa	Known RBP	13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	PARP2	Q9UGN5	583 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	MRPS17	Q9Y2R5	130 aa	Known RBP	13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	GTF3C3	Q9Y5Q9	886 aa		13.79	□□□□□ -0.2
PABPC4-215	ENST00000484555	ZFHX4	Q86UP3	3567 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	CCDC194	A0A1B0GVG4	234 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	PTGES	O14684	152 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	ADAM12	O43184	909 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	B4GALT5	O43286	388 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	KIF4A	O95239	1232 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	ADRB1	P08588	477 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	TDGF1	P13385	188 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	ADCY1	Q08828	1119 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	TOB2	Q14106	344 aa	Predicted RBP	13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	NAB2	Q15742	525 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	PABPC1L	Q4VXU2	614 aa	Known RBP	13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	NCAPH2	Q6IBW4	605 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	PPP4R3CP	Q6ZMV5	832 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	TPRG1	Q6ZUI0	275 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	CDR2L	Q86X02	465 aa	Predicted RBP	13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	CEP57	Q86XR8	500 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	SLFN12	Q8IYM2	578 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	ZNF687	Q8N1G0	1237 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	SLC7A14	Q8TBB6	771 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	DNASE1L2	Q92874	299 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	PRIMPOL	Q96LW4	560 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	HSD17B14	Q9BPX1	270 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	IER2	Q9BTL4	223 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	HCFC1R1	Q9NWW0	138 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	CACNG4	Q9UBN1	327 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	DAXX	Q9UER7	740 aa	Predicted RBP	13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	POLI	Q9UNA4	740 aa		13.78	□□□□□ -0.2
PABPC4-215	ENST00000484555	CASTOR2	A6NHX0	329 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	CPLX1	O14810	134 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	CCNT1	O60563	726 aa	Known RBP	13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	BAG4	O95429	457 aa	Known RBP	13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	TH	P07101	528 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	FGFR3	P22607	806 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	NRL	P54845	237 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	CYP4A11	Q02928	519 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	FAM187B	Q17R55	369 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	TSSK4	Q6SA08	328 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	RUFY3	Q7L099	469 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	TPH2	Q8IWU9	490 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	HASPIN	Q8TF76	798 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	ELSPBP1	Q96BH3	223 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	AIFM3	Q96NN9	605 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	PLA2G2F	Q9BZM2	168 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	FZD8	Q9H461	694 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	EPG5	Q9HCE0	2579 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	PARD6A	Q9NPB6	346 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	MTRR	Q9UBK8	725 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	GMEB2	Q9UKD1	530 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	KCNJ14	Q9UNX9	436 aa		13.77	□□□□□ -0.21
PABPC4-215	ENST00000484555	DCDC2B	A2VCK2	349 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	TMEM189-UBE2V1	I3L0A0	370 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	MARCH6	O60337	910 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	LRP3	O75074	770 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	XRCC6	P12956	609 aa	Known RBP eCLIP	13.76	□□□□□ -0.21	1e-9	■□□□□ 8
PABPC4-215	ENST00000484555	OR1D2	P34982	312 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	RARRES1	P49788	294 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	MTAP	Q13126	283 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	CPLX2	Q6PUV4	134 aa	Known RBP	13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	POTEH	Q6S545	545 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	POTED	Q86YR6	584 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	CELF5	Q8N6W0	485 aa	Known RBP	13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	CHRD	Q9H2X0	955 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	ZSWIM6	Q9HCJ5	1215 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	USP18	Q9UMW8	372 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	MRPS23	Q9Y3D9	190 aa	Known RBP	13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	BACE2	Q9Y5Z0	518 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	VWA8	A3KMH1	1905 aa		13.76	□□□□□ -0.21
PABPC4-215	ENST00000484555	MAN2B1	O00754	1011 aa		13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	MICAL2	O94851	1124 aa		13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	RHO	P08100	348 aa		13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	RBM25	P49756	843 aa	Known RBP	13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	IRX6	P78412	446 aa	Predicted RBP	13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	LAIR1	Q6GTX8	287 aa		13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	TANGO2	Q6ICL3	276 aa		13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	MCRS1	Q96EZ8	462 aa		13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	TRPV5	Q9NQA5	729 aa		13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	HEBP1	Q9NRV9	189 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms