RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 NRP1O14786 923 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 FSCN2O14926 492 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 RHOBTB3O94955 611 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 DNAJB1P25685 340 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 ADSSP30520 456 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 KCNB1Q14721 858 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 COL19A1Q14993 1142 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 SLC10A6Q3KNW5 377 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
COL2A1-206ENST00000483376 CD302Q8IX05 232 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 TMEM174Q8WUU8 243 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 MSTO1Q9BUK6 570 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 NSUN3Q9H649 340 aaKnown RBP17.75■□□□□ 0.43
COL2A1-206ENST00000483376 NGRNQ9NPE2 291 aaKnown RBP17.75■□□□□ 0.43
COL2A1-206ENST00000483376 TLR9Q9NR96 1032 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 EXOC1Q9NV70 894 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 SLC38A7Q9NVC3 462 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 CGNQ9P2M7 1197 aaKnown RBP17.75■□□□□ 0.43
COL2A1-206ENST00000483376 CPSF3Q9UKF6 684 aaKnown RBP17.75■□□□□ 0.43
COL2A1-206ENST00000483376 FAN1Q9Y2M0 1017 aa17.75■□□□□ 0.43
COL2A1-206ENST00000483376 SMIM28A0A1B0GU29 152 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 TMEM189-UBE2V1I3L0A0 370 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 MEFVO15553 781 aaPredicted RBP17.74■□□□□ 0.43
COL2A1-206ENST00000483376 PRPF6O94906 941 aaKnown RBP17.74■□□□□ 0.43
COL2A1-206ENST00000483376 RPN1P04843 607 aaKnown RBP17.74■□□□□ 0.43
COL2A1-206ENST00000483376 HOXD13P35453 343 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 PBX3P40426 434 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 MATR3P43243 847 aaKnown RBP eCLIP17.74■□□□□ 0.43
COL2A1-206ENST00000483376 UBE2HP62256 183 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 KMT5BQ4FZB7 885 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 TMEM173Q86WV6 379 aaPredicted RBP17.74■□□□□ 0.43
COL2A1-206ENST00000483376 GPR65Q8IYL9 337 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 RNF168Q8IYW5 571 aaPredicted RBP17.74■□□□□ 0.43
COL2A1-206ENST00000483376 SPATA20Q8TB22 786 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 SCFD1Q8WVM8 642 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 HPS3Q969F9 1004 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 UROC1Q96N76 676 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 GBP3Q9H0R5 595 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 MARCH5Q9NX47 278 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 AGO2Q9UKV8 859 aaKnown RBP17.74■□□□□ 0.43
COL2A1-206ENST00000483376 IRAK3Q9Y616 596 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 REV3LO60673 3130 aa17.74■□□□□ 0.43
COL2A1-206ENST00000483376 SPTBN5Q9NRC6 3674 aaKnown RBP17.74■□□□□ 0.43
COL2A1-206ENST00000483376 TDRD15B5MCY1 1934 aaKnown RBP17.73■□□□□ 0.43
COL2A1-206ENST00000483376 FSD2A1L4K1 749 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 NCK2O43639 380 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 LDHAP00338 332 aaKnown RBP17.73■□□□□ 0.43
COL2A1-206ENST00000483376 HARSP12081 509 aaKnown RBP17.73■□□□□ 0.43
COL2A1-206ENST00000483376 ENOX2Q16206 610 aaKnown RBP17.73■□□□□ 0.43
COL2A1-206ENST00000483376 C12orf56Q8IXR9 622 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 SYCP3Q8IZU3 236 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 KIAA0895Q8NCT3 520 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 GLIS3Q8NEA6 775 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 POMGNT1Q8WZA1 660 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 CCDC47Q96A33 483 aaKnown RBP17.73■□□□□ 0.43
COL2A1-206ENST00000483376 COLEC11Q9BWP8 271 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 CXCL16Q9H2A7 254 aa17.73■□□□□ 0.43
COL2A1-206ENST00000483376 HOOK1Q9UJC3 728 aaKnown RBP17.73■□□□□ 0.43
COL2A1-206ENST00000483376 PLXNA4Q9HCM2 1894 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 TISP43B9A030 160 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 NT5C1B-RDH14C9J2C7 533 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 PRR29P0C7W0 189 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 CXCL8P10145 99 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 CYP3A5P20815 502 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 OR1G1P47890 313 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 OSTNP61366 133 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 STK4Q13043 487 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 HSP90AA2PQ14568 343 aaPredicted RBP17.72■□□□□ 0.43
COL2A1-206ENST00000483376 ZBTB6Q15916 424 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 BCL7CQ8WUZ0 217 aaPredicted RBP17.72■□□□□ 0.43
COL2A1-206ENST00000483376 DDX27Q96GQ7 796 aaKnown RBP17.72■□□□□ 0.43
COL2A1-206ENST00000483376 ZMAT2Q96NC0 199 aaKnown RBP17.72■□□□□ 0.43
COL2A1-206ENST00000483376 GTPBP4Q9BZE4 634 aaKnown RBP17.72■□□□□ 0.43
COL2A1-206ENST00000483376 ZBP1Q9H171 429 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 ASB7Q9H672 318 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 RPF1Q9H9Y2 349 aaKnown RBP17.72■□□□□ 0.43
COL2A1-206ENST00000483376 DERAQ9Y315 318 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 CITO14578 2027 aa17.72■□□□□ 0.43
COL2A1-206ENST00000483376 XIRP2A4UGR9 3374 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 TGFB1I1O43294 461 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 KIF20AO95235 890 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 CTSAP10619 480 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 RPL9P32969 192 aaKnown RBP17.71■□□□□ 0.43
COL2A1-206ENST00000483376 IRS1P35568 1242 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 TNFSF9P41273 254 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 ERVFC1P60507 584 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 PPP2R3AQ06190 1150 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 BMS1Q14692 1282 aaKnown RBP17.71■□□□□ 0.43
COL2A1-206ENST00000483376 KNOP1Q1ED39 458 aaKnown RBP17.71■□□□□ 0.43
COL2A1-206ENST00000483376 ZBTB41Q5SVQ8 909 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 CRELD2Q6UXH1 353 aaPredicted RBP17.71■□□□□ 0.43
COL2A1-206ENST00000483376 NT5DC4Q86YG4 428 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 GOLGA5Q8TBA6 731 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 GSDMAQ96QA5 445 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 CDCA3Q99618 268 aaPredicted RBP17.71■□□□□ 0.43
COL2A1-206ENST00000483376 IKZF4Q9H2S9 585 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 KIAA1586Q9HCI6 787 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 SLC39A2Q9NP94 309 aa17.71■□□□□ 0.43
COL2A1-206ENST00000483376 MYO7AQ13402 2215 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms