RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SMIM28A0A1B0GU29 152 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 ANKRD63C9JTQ0 380 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 FSCN2O14926 492 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 NCK2O43639 380 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 GARTP22102 1010 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 KCNA1Q09470 495 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 EPM2AIP1Q7L775 607 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-214ENST00000482733 TMEM173Q86WV6 379 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-214ENST00000482733 CD302Q8IX05 232 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 ZNF507Q8TCN5 953 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 POMGNT1Q8WZA1 660 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 HPS3Q969F9 1004 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 UROC1Q96N76 676 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 PPP1R10Q96QC0 940 aaKnown RBP18.09■□□□□ 0.49
HMGN1-214ENST00000482733 RPF1Q9H9Y2 349 aaKnown RBP18.09■□□□□ 0.49
HMGN1-214ENST00000482733 ENTPD7Q9NQZ7 604 aa18.09■□□□□ 0.49
HMGN1-214ENST00000482733 AGO2Q9UKV8 859 aaKnown RBP18.09■□□□□ 0.49
HMGN1-214ENST00000482733 PRG3Q9Y2Y8 225 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-214ENST00000482733 MYO9BQ13459 2157 aa18.08■□□□□ 0.49
HMGN1-214ENST00000482733 KIAA0391O15091 583 aaKnown RBP18.08■□□□□ 0.48
HMGN1-214ENST00000482733 KLRC4O43908 158 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 FAM189A1O60320 539 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 ERVFC1P60507 584 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 SNRPFP62306 86 aaKnown RBP18.08■□□□□ 0.48
HMGN1-214ENST00000482733 PPP2R3AQ06190 1150 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 SKIV2LQ15477 1246 aaKnown RBP18.08■□□□□ 0.48
HMGN1-214ENST00000482733 NAB2Q15742 525 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 SLC10A6Q3KNW5 377 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 KMT5BQ4FZB7 885 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 SEZ6Q53EL9 994 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 TCEAL5Q5H9L2 206 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 TMC7Q7Z402 723 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 ENGASEQ8NFI3 743 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 TIGD1Q96MW7 591 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 TCF25Q9BQ70 676 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 HOOK1Q9UJC3 728 aaKnown RBP18.08■□□□□ 0.48
HMGN1-214ENST00000482733 CPSF3Q9UKF6 684 aaKnown RBP18.08■□□□□ 0.48
HMGN1-214ENST00000482733 COL6A3P12111 3177 aa18.08■□□□□ 0.48
HMGN1-214ENST00000482733 KIAA1671Q9BY89 1806 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 FSD2A1L4K1 749 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 LDHAP00338 332 aaKnown RBP18.07■□□□□ 0.48
HMGN1-214ENST00000482733 RPN1P04843 607 aaKnown RBP18.07■□□□□ 0.48
HMGN1-214ENST00000482733 CXCL8P10145 99 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 ADSSP30520 456 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 IRS1P35568 1242 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 DPYDQ12882 1025 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 SNW1Q13573 536 aaKnown RBP18.07■□□□□ 0.48
HMGN1-214ENST00000482733 HSP90AA2PQ14568 343 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-214ENST00000482733 SMC1AQ14683 1233 aaKnown RBP18.07■□□□□ 0.48
HMGN1-214ENST00000482733 BMT2Q1RMZ1 405 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 GLRA4Q5JXX5 417 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 VPS52Q8N1B4 723 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 BCL7CQ8WUZ0 217 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-214ENST00000482733 SCFD1Q8WVM8 642 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 DDX27Q96GQ7 796 aaKnown RBP18.07■□□□□ 0.48
HMGN1-214ENST00000482733 CXCL16Q9H2A7 254 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 SLC39A2Q9NP94 309 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 MARCH5Q9NX47 278 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 COG5Q9UP83 839 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 TCHHQ07283 1943 aa18.07■□□□□ 0.48
HMGN1-214ENST00000482733 TTC26A0AVF1 554 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 CASTOR2A6NHX0 329 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 TISP43B9A030 160 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 XPOTO43592 962 aaKnown RBP18.06■□□□□ 0.48
HMGN1-214ENST00000482733 TADA2AO75478 443 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 CSPG5O95196 566 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 ADRB2P07550 413 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 CTSAP10619 480 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 TNFSF9P41273 254 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 ENOX2Q16206 610 aaKnown RBP18.06■□□□□ 0.48
HMGN1-214ENST00000482733 ELOA2Q8IYF1 753 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-214ENST00000482733 GLIS3Q8NEA6 775 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 ZMAT2Q96NC0 199 aaKnown RBP18.06■□□□□ 0.48
HMGN1-214ENST00000482733 CDCA3Q99618 268 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-214ENST00000482733 ZBP1Q9H171 429 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
HMGN1-214ENST00000482733 ADAM28Q9UKQ2 775 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 SSX2IPQ9Y2D8 614 aa18.06■□□□□ 0.48
HMGN1-214ENST00000482733 RHOBTB3O94955 611 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 KIF20AO95235 890 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 SOD2P04179 222 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 PRR29P0C7W0 189 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 RPL9P32969 192 aaKnown RBP18.05■□□□□ 0.48
HMGN1-214ENST00000482733 UBE2HP62256 183 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 KCNB1Q14721 858 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 ZBTB41Q5SVQ8 909 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 PLPP4Q5VZY2 271 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 ARMCX5Q6P1M9 558 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 DCLRE1AQ6PJP8 1040 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 HS2ST1Q7LGA3 356 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 MRPL43Q8N983 215 aaKnown RBP18.05■□□□□ 0.48
HMGN1-214ENST00000482733 HLA-CQ95604 372 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 HERC2P3Q9BVR0 1158 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 IKZF4Q9H2S9 585 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 ASB7Q9H672 318 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 TLE6Q9H808 572 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 IRAK3Q9Y616 596 aa18.05■□□□□ 0.48
HMGN1-214ENST00000482733 PRRC2BQ5JSZ5 2229 aaKnown RBP18.04■□□□□ 0.48
HMGN1-214ENST00000482733 SF3B1O75533 1304 aaKnown RBP eCLIP18.04■□□□□ 0.484e-6■□□□□ 8.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms