RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 POMGNT1Q8WZA1 660 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 SNX27Q96L92 541 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 COLEC11Q9BWP8 271 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 NSUN3Q9H649 340 aaKnown RBP22.81■■□□□ 1.24
SEC13-217ENST00000482647 PLEKHA5Q9HAU0 1116 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 SLC39A2Q9NP94 309 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 TLR9Q9NR96 1032 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 STK39Q9UEW8 545 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 AGO2Q9UKV8 859 aaKnown RBP22.81■■□□□ 1.24
SEC13-217ENST00000482647 PRUNE2Q8WUY3 3088 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 TISP43B9A030 160 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 KCNE1P15382 129 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 ADSSP30520 456 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 DPYDQ12882 1025 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 SLC10A6Q3KNW5 377 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 GLRA4Q5JXX5 417 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 DDX53Q86TM3 631 aaKnown RBP22.8■■□□□ 1.24
SEC13-217ENST00000482647 TMEM173Q86WV6 379 aaPredicted RBP22.8■■□□□ 1.24
SEC13-217ENST00000482647 TIGD1Q96MW7 591 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 PPP1R10Q96QC0 940 aaKnown RBP22.8■■□□□ 1.24
SEC13-217ENST00000482647 IKZF4Q9H2S9 585 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 SLC38A7Q9NVC3 462 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 CNTN3Q9P232 1028 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 HOOK1Q9UJC3 728 aaKnown RBP22.8■■□□□ 1.24
SEC13-217ENST00000482647 PRG3Q9Y2Y8 225 aaPredicted RBP22.8■■□□□ 1.24
SEC13-217ENST00000482647 UBE4BO95155 1302 aa22.8■■□□□ 1.24
SEC13-217ENST00000482647 FAM189A1O60320 539 aa22.79■■□□□ 1.24
SEC13-217ENST00000482647 GADD45BO75293 160 aaPredicted RBP22.79■■□□□ 1.24
SEC13-217ENST00000482647 CSPG5O95196 566 aa22.79■■□□□ 1.24
SEC13-217ENST00000482647 BMS1Q14692 1282 aaKnown RBP22.79■■□□□ 1.24
SEC13-217ENST00000482647 SCFD1Q8WVM8 642 aa22.79■■□□□ 1.24
SEC13-217ENST00000482647 PPP2R3CQ969Q6 453 aa22.79■■□□□ 1.24
SEC13-217ENST00000482647 RPF1Q9H9Y2 349 aaKnown RBP22.79■■□□□ 1.24
SEC13-217ENST00000482647 PRRC2BQ5JSZ5 2229 aaKnown RBP22.79■■□□□ 1.24
SEC13-217ENST00000482647 NLRC5Q86WI3 1866 aa22.79■■□□□ 1.24
SEC13-217ENST00000482647 PRR29P0C7W0 189 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 CXCL8P10145 99 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 GARTP22102 1010 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 HOXD13P35453 343 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 IRS1P35568 1242 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 TNFSF9P41273 254 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 ERVFC1P60507 584 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 STK4Q13043 487 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 NAB2Q15742 525 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 ZBTB41Q5SVQ8 909 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 TMC7Q7Z402 723 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 BCL7CQ8WUZ0 217 aaPredicted RBP22.78■■□□□ 1.24
SEC13-217ENST00000482647 TCF25Q9BQ70 676 aa22.78■■□□□ 1.24
SEC13-217ENST00000482647 NGRNQ9NPE2 291 aaKnown RBP22.78■■□□□ 1.24
SEC13-217ENST00000482647 CPSF3Q9UKF6 684 aaKnown RBP22.78■■□□□ 1.24
SEC13-217ENST00000482647 TTC26A0AVF1 554 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 CASTOR2A6NHX0 329 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 MEFVO15553 781 aaPredicted RBP22.77■■□□□ 1.24
SEC13-217ENST00000482647 ACOT2P49753 483 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 UBE2HP62256 183 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 SNRPFP62306 86 aaKnown RBP22.77■■□□□ 1.24
SEC13-217ENST00000482647 POU5F1Q01860 360 aaKnown RBP22.77■■□□□ 1.24
SEC13-217ENST00000482647 PPP2R3AQ06190 1150 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 HSP90AA2PQ14568 343 aaPredicted RBP22.77■■□□□ 1.24
SEC13-217ENST00000482647 SKIV2LQ15477 1246 aaKnown RBP22.77■■□□□ 1.24
SEC13-217ENST00000482647 ENOX2Q16206 610 aaKnown RBP22.77■■□□□ 1.24
SEC13-217ENST00000482647 BMT2Q1RMZ1 405 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 TCEAL5Q5H9L2 206 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 CD302Q8IX05 232 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 VPS52Q8N1B4 723 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 UROC1Q96N76 676 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 ZMAT2Q96NC0 199 aaKnown RBP22.77■■□□□ 1.24
SEC13-217ENST00000482647 ENTPD7Q9NQZ7 604 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 MARCH5Q9NX47 278 aa22.77■■□□□ 1.24
SEC13-217ENST00000482647 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.77■■□□□ 1.24
SEC13-217ENST00000482647 LACTBL1A8MY62 500 aa22.76■■□□□ 1.23
SEC13-217ENST00000482647 FSCN2O14926 492 aa22.76■■□□□ 1.23
SEC13-217ENST00000482647 KIAA0391O15091 583 aaKnown RBP22.76■■□□□ 1.23
SEC13-217ENST00000482647 KINO60870 393 aaKnown RBP22.76■■□□□ 1.23
SEC13-217ENST00000482647 PRPF40AO75400 957 aaKnown RBP22.76■■□□□ 1.23
SEC13-217ENST00000482647 TADA2AO75478 443 aa22.76■■□□□ 1.23
SEC13-217ENST00000482647 LDHAP00338 332 aaKnown RBP22.76■■□□□ 1.23
SEC13-217ENST00000482647 KCNB1Q14721 858 aa22.76■■□□□ 1.23
SEC13-217ENST00000482647 CLEC17AQ6ZS10 378 aa22.76■■□□□ 1.23
SEC13-217ENST00000482647 NELFCDQ8IXH7 590 aa22.76■■□□□ 1.23
SEC13-217ENST00000482647 RABGGTAQ92696 567 aa22.76■■□□□ 1.23
SEC13-217ENST00000482647 DDX27Q96GQ7 796 aaKnown RBP22.76■■□□□ 1.23
SEC13-217ENST00000482647 TSPAN18Q96SJ8 248 aa22.76■■□□□ 1.23
SEC13-217ENST00000482647 COL4A4P53420 1690 aaPredicted RBP22.75■■□□□ 1.23
SEC13-217ENST00000482647 REV3LO60673 3130 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 NCK2O43639 380 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 RHOBTB3O94955 611 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 SMC2O95347 1197 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 ADRB2P07550 413 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 PNOCQ13519 176 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 SMC1AQ14683 1233 aaKnown RBP22.75■■□□□ 1.23
SEC13-217ENST00000482647 KNOP1Q1ED39 458 aaKnown RBP22.75■■□□□ 1.23
SEC13-217ENST00000482647 ARMCX5Q6P1M9 558 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 DCLRE1AQ6PJP8 1040 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 HS2ST1Q7LGA3 356 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 ELOA2Q8IYF1 753 aaPredicted RBP22.75■■□□□ 1.23
SEC13-217ENST00000482647 KIAA0895Q8NCT3 520 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 PAAF1Q9BRP4 392 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 CBWD1Q9BRT8 395 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 FAM213AQ9BRX8 229 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms