RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 GLB1LQ6UWU2 654 aa14.39□□□□□ -0.11
HDAC1-208ENST00000482310 CRELD2Q6UXH1 353 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-208ENST00000482310 CSGALNACT2Q8N6G5 542 aa14.39□□□□□ -0.11
HDAC1-208ENST00000482310 URGCPQ8TCY9 931 aa14.39□□□□□ -0.11
HDAC1-208ENST00000482310 SNX27Q96L92 541 aa14.39□□□□□ -0.11
HDAC1-208ENST00000482310 DUSP9Q99956 384 aaKnown RBP14.39□□□□□ -0.11
HDAC1-208ENST00000482310 ELAC1Q9H777 363 aaKnown RBP14.39□□□□□ -0.11
HDAC1-208ENST00000482310 CGNQ9P2M7 1197 aaKnown RBP14.39□□□□□ -0.11
HDAC1-208ENST00000482310 CACNG4Q9UBN1 327 aa14.39□□□□□ -0.11
HDAC1-208ENST00000482310 RWDD2AQ9UIY3 292 aa14.39□□□□□ -0.11
HDAC1-208ENST00000482310 CPSF3Q9UKF6 684 aaKnown RBP14.39□□□□□ -0.11
HDAC1-208ENST00000482310 LCHNA4D1U4 455 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 CETN3O15182 167 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 OFD1O75665 1012 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 GJB5O95377 273 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 LDHAP00338 332 aaKnown RBP14.38□□□□□ -0.11
HDAC1-208ENST00000482310 RPL13P26373 211 aaKnown RBP14.38□□□□□ -0.11
HDAC1-208ENST00000482310 PBX2P40425 430 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 SNRPFP62306 86 aaKnown RBP14.38□□□□□ -0.11
HDAC1-208ENST00000482310 RNASELQ05823 741 aaKnown RBP14.38□□□□□ -0.11
HDAC1-208ENST00000482310 BTG3Q14201 252 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-208ENST00000482310 EDRF1Q3B7T1 1238 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 SLC10A6Q3KNW5 377 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 CCDC40Q4G0X9 1142 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 C12orf56Q8IXR9 622 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 AOPEPQ8N6M6 819 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 CCDC127Q96BQ5 260 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 CASD1Q96PB1 797 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 MED15Q96RN5 788 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 FUCA2Q9BTY2 467 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 SRRTQ9BXP5 876 aaKnown RBP14.38□□□□□ -0.11
HDAC1-208ENST00000482310 MMRN2Q9H8L6 949 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 TOPORSQ9NS56 1045 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-208ENST00000482310 MIOSQ9NXC5 875 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 PLAGL2Q9UPG8 496 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 FRMD4BQ9Y2L6 1034 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 GIT1Q9Y2X7 761 aa14.38□□□□□ -0.11
HDAC1-208ENST00000482310 COL4A4P53420 1690 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-208ENST00000482310 ZNF233A6NK53 670 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 PTGESO14684 152 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 HOXA2O43364 376 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 DGKIO75912 1065 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 AKAP3O75969 853 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 NFICP08651 508 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 DLATP10515 647 aaKnown RBP14.37□□□□□ -0.11
HDAC1-208ENST00000482310 EPB41P11171 864 aaKnown RBP14.37□□□□□ -0.11
HDAC1-208ENST00000482310 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 CYP24A1Q07973 514 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 LRIT3Q3SXY7 679 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 NOMO2Q5JPE7 1267 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 LRRC55Q6ZSA7 311 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 BRSK2Q8IWQ3 736 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 FAM186BQ8IYM0 893 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 CRIPAKQ8N1N5 446 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 DEFB123Q8N688 67 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 RABGGTAQ92696 567 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 C18orf25Q96B23 403 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-208ENST00000482310 KIF12Q96FN5 646 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 TMEM117Q9H0C3 514 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 PDE11AQ9HCR9 933 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 DMAC2Q9NW81 257 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-208ENST00000482310 MTMR10Q9NXD2 777 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 MYO9BQ13459 2157 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 ATG2AQ2TAZ0 1938 aa14.37□□□□□ -0.11
HDAC1-208ENST00000482310 CASTOR2A6NHX0 329 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 KIAA0391O15091 583 aaKnown RBP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 ZC3H11AO75152 810 aaKnown RBP eCLIP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 TRIM49P0CI25 452 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 TRIM49CP0CI26 452 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 PBX3P40426 434 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 FKBP3Q00688 224 aaKnown RBP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 TMEM132DQ14C87 1099 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 KYAT1Q16773 422 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 SLC9A9Q8IVB4 645 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 PHOSPHO2Q8TCD6 241 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 ZMAT2Q96NC0 199 aaKnown RBP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 FAM193BQ96PV7 902 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 FNBP1Q96RU3 617 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 POP1Q99575 1024 aaKnown RBP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 TSPY26PQ9H489 355 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 UBN1Q9NPG3 1134 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 TBC1D13Q9NVG8 400 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 TUBGCP4Q9UGJ1 667 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 MTUS1Q9ULD2 1270 aa14.36□□□□□ -0.11
HDAC1-208ENST00000482310 YBX2Q9Y2T7 364 aaKnown RBP14.36□□□□□ -0.11
HDAC1-208ENST00000482310 UNC80Q8N2C7 3258 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 SMIM28A0A1B0GU29 152 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 TTC26A0AVF1 554 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 B4GALT3O60512 393 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 CLSTN1O94985 981 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 CA3P07451 260 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 KRT13P13646 458 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 TNNI1P19237 187 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 ERCC5P28715 1186 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-208ENST00000482310 PSMC2P35998 433 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms