RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 CNR2P34972 360 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 PTENP60484 403 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 FGD1P98174 961 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 SATB1Q01826 763 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 ELAVL2Q12926 359 aaKnown RBP16.62■□□□□ 0.25
HDAC6-224ENST00000481929 TUSC3Q13454 348 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 RAB33AQ14088 237 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 GRM2Q14416 872 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 RTL10Q7L3V2 364 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 ETNPPLQ8TBG4 499 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 FAM3CQ92520 227 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 PAAF1Q9BRP4 392 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 ESYT1Q9BSJ8 1104 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 VPS54Q9P1Q0 977 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 PARP2Q9UGN5 583 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 CYP3A7-CYP3A51PA0A087WV96 503 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 CASTOR2A6NHX0 329 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 CHURC1-FNTBB4DL54 471 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 EML1O00423 815 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 HRO43593 1189 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 NPTXRO95502 500 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 CEBPBP17676 345 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 ARF4P18085 180 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-224ENST00000481929 CYP3A7P24462 503 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 OR1D2P34982 312 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 FNTBP49356 437 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 LIMK1P53667 647 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 TFDP1Q14186 410 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 MXD4Q14582 209 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-224ENST00000481929 ACAP1Q15027 740 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 SLC5A9Q2M3M2 681 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 IRF7Q92985 503 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 MTRQ99707 1265 aa16.61■□□□□ 0.25
HDAC6-224ENST00000481929 TRMT61BQ9BVS5 477 aaKnown RBP16.61■□□□□ 0.25
HDAC6-224ENST00000481929 P4HBP07237 508 aaKnown RBP16.6■□□□□ 0.25
HDAC6-224ENST00000481929 NLRP5P59047 1200 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 MBTD1Q05BQ5 628 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 SRSF5Q13243 272 aaKnown RBP16.6■□□□□ 0.25
HDAC6-224ENST00000481929 AMHR2Q16671 573 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 SLC27A1Q6PCB7 646 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 CEP68Q76N32 757 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 OTUD6AQ7L8S5 288 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 LONP2Q86WA8 852 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 IFNLR1Q8IU57 520 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-224ENST00000481929 C12orf50Q8NA57 414 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-224ENST00000481929 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-224ENST00000481929 ZFP14Q9HCL3 533 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 AVENQ9NQS1 362 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-224ENST00000481929 WRAP73Q9P2S5 460 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-224ENST00000481929 PIAS3Q9Y6X2 628 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 FRYQ5TBA9 3013 aa16.6■□□□□ 0.25
HDAC6-224ENST00000481929 FCARP24071 287 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 YWHABP31946 246 aaKnown RBP16.59■□□□□ 0.25
HDAC6-224ENST00000481929 POU5F1BQ06416 359 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 PPP2R5CQ13362 524 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 XKR9Q5GH70 373 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 MOXD1Q6UVY6 613 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-224ENST00000481929 SPEM1Q8N4L4 309 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 FAM160A2Q8N612 972 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-224ENST00000481929 RNF26Q9BY78 433 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-224ENST00000481929 TRPV5Q9NQA5 729 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 MTRRQ9UBK8 725 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 DDX25Q9UHL0 483 aaKnown RBP16.59■□□□□ 0.25
HDAC6-224ENST00000481929 PKD1L2Q7Z442 2459 aa16.59■□□□□ 0.25
HDAC6-224ENST00000481929 B4GALT5O43286 388 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 CHRNB1P11230 501 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 PTPN2P17706 415 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 GDI1P31150 447 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 ADCK5Q3MIX3 580 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 FAM78AQ5JUQ0 283 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 HEATR6Q6AI08 1181 aaKnown RBP16.58■□□□□ 0.24
HDAC6-224ENST00000481929 POTEHQ6S545 545 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 CDR2LQ86X02 465 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-224ENST00000481929 C4orf19Q8IY42 314 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 LXNQ9BS40 222 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 SLC26A6Q9BXS9 759 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 ZNF334Q9HCZ1 680 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-224ENST00000481929 SH3GLB2Q9NR46 395 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 VAV3Q9UKW4 847 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 CDY1Q9Y6F8 540 aa16.58■□□□□ 0.24
HDAC6-224ENST00000481929 IGF2RP11717 2491 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 NID2Q14112 1375 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 TM4SF5O14894 197 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 PAPSS2O95340 614 aaPredicted RBP16.57■□□□□ 0.24
HDAC6-224ENST00000481929 LRG1P02750 347 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 THP07101 528 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 HOXB3P14651 431 aaPredicted RBP16.57■□□□□ 0.24
HDAC6-224ENST00000481929 PSMC3P17980 439 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 CAPSQ13938 189 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 LRRC32Q14392 662 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 GAS6Q14393 721 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 KRT32Q14532 448 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 SF3A2Q15428 464 aaKnown RBP16.57■□□□□ 0.24
HDAC6-224ENST00000481929 MAP4K3Q8IVH8 894 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 XPNPEP1Q9NQW7 623 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 VWA8A3KMH1 1905 aa16.57■□□□□ 0.24
HDAC6-224ENST00000481929 COL4A2P08572 1712 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 SDK1Q7Z5N4 2213 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 A0A1B0GUA9 196 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms