RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 PTPN18Q99952 460 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 SENP6Q9GZR1 1112 aaPredicted RBP6.55□□□□□ -1.36
UPF3A-207ENST00000481131 ARMT1Q9H993 441 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 CALCOCO1Q9P1Z2 691 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 NR2E1Q9Y466 385 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 ACTL7AQ9Y615 435 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 ZMYM3Q14202 1370 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 NT5C1B-RDH14C9J2C7 533 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 NUAK1O60285 661 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 NOBOXO60393 691 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 CNOT4O95628 575 aaKnown RBP6.54□□□□□ -1.36
UPF3A-207ENST00000481131 ZSCAN22P10073 491 aaPredicted RBP6.54□□□□□ -1.36
UPF3A-207ENST00000481131 TYRP14679 529 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 ALOX15P16050 662 aaPredicted RBP6.54□□□□□ -1.36
UPF3A-207ENST00000481131 PTPN7P35236 360 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 BIRC2Q13490 618 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 PICALMQ13492 652 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 PLS1Q14651 629 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 MFSD14BQ5SR56 506 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 RNF220Q5VTB9 566 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 KRT40Q6A162 431 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 APOA5Q6Q788 366 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 MAEAQ7L5Y9 396 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 ZNF572Q7Z3I7 529 aaPredicted RBP6.54□□□□□ -1.36
UPF3A-207ENST00000481131 STRBPQ96SI9 672 aaKnown RBP6.54□□□□□ -1.36
UPF3A-207ENST00000481131 APOL5Q9BWW9 433 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 C22orf23Q9BZE7 217 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 KCNH6Q9H252 994 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 AGO3Q9H9G7 860 aaKnown RBP6.54□□□□□ -1.36
UPF3A-207ENST00000481131 ZMAT3Q9HA38 289 aaKnown RBP6.54□□□□□ -1.36
UPF3A-207ENST00000481131 LMBRD1Q9NUN5 540 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 ABCF2Q9UG63 623 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 STAP2Q9UGK3 403 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 POLHQ9Y253 713 aa6.54□□□□□ -1.36
UPF3A-207ENST00000481131 GOLIM4O00461 696 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 B4GALT4O60513 344 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 MYL3P08590 195 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 PEX2P28328 305 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 ALDH1A3P47895 512 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 CCDC157Q569K6 752 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 DARS2Q6PI48 645 aaKnown RBP6.53□□□□□ -1.36
UPF3A-207ENST00000481131 TMEM151BQ8IW70 566 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 CMTM4Q8IZR5 234 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 CASKIN2Q8WXE0 1202 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 RABGGTAQ92696 567 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 SLC35A4Q96G79 324 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 IL23AQ9NPF7 189 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 TMEM140Q9NV12 185 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 NCDNQ9UBB6 729 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 PHTF1Q9UMS5 762 aa6.53□□□□□ -1.36
UPF3A-207ENST00000481131 TOP2AP11388 1531 aaKnown RBP6.53□□□□□ -1.36
UPF3A-207ENST00000481131 H3BUI4 141 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 NRP1O14786 923 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 TPD52L2O43399 206 aaKnown RBP6.52□□□□□ -1.37
UPF3A-207ENST00000481131 SLC26A4O43511 780 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 CTXN1P60606 82 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 GPSM2P81274 684 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 SP140Q13342 867 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 TCERG1LQ5VWI1 586 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 GADL1Q6ZQY3 521 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 GPR135Q8IZ08 494 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 SH2D3CQ8N5H7 860 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 CELF5Q8N6W0 485 aaKnown RBP6.52□□□□□ -1.37
UPF3A-207ENST00000481131 OR5M3Q8NGP4 307 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 PARD3BQ8TEW8 1205 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 LRTOMTQ8WZ04 291 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 CDC5LQ99459 802 aaKnown RBP6.52□□□□□ -1.37
UPF3A-207ENST00000481131 RUVBL1Q9Y265 456 aaKnown RBP6.52□□□□□ -1.37
UPF3A-207ENST00000481131 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
UPF3A-207ENST00000481131 UBE2QL1A1L167 161 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 CFAP69A5D8W1 941 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 PQBP1O60828 265 aaKnown RBP6.51□□□□□ -1.37
UPF3A-207ENST00000481131 STC2O76061 302 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 SASH1O94885 1247 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 IFIT2P09913 472 aaKnown RBP6.51□□□□□ -1.37
UPF3A-207ENST00000481131 SERPINB3P29508 390 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 GZMKP49863 264 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 CACNB3P54284 484 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 MRPL49Q13405 166 aaKnown RBP6.51□□□□□ -1.37
UPF3A-207ENST00000481131 RIN1Q13671 783 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 BRD3Q15059 726 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 FAM214AQ32MH5 1076 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 AFMIDQ63HM1 303 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 PPP1R3BQ86XI6 285 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 PLXDC1Q8IUK5 500 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 SIAH1Q8IUQ4 282 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 NEIL1Q96FI4 390 aaPredicted RBP6.51□□□□□ -1.37
UPF3A-207ENST00000481131 FAM167AQ96KS9 214 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 MYOCQ99972 504 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 DPYSL5Q9BPU6 564 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 PNPOQ9NVS9 261 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 SLC23A1Q9UHI7 598 aa6.51□□□□□ -1.37
UPF3A-207ENST00000481131 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
UPF3A-207ENST00000481131 ARID4BQ4LE39 1312 aaPredicted RBP6.5□□□□□ -1.37
UPF3A-207ENST00000481131 PMS2P1A4D2B8 440 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 F2RL2O00254 374 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 ARIH2O95376 493 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 CD1AP06126 327 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 SBK3P0C264 359 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 IL2RBP14784 551 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms