RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 FAM212AQ96EL1 285 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 SNX27Q96L92 541 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 ZMAT2Q96NC0 199 aaKnown RBP22.2■■□□□ 1.14
CTSA-206ENST00000480961 GBP4Q96PP9 640 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 CBWD1Q9BRT8 395 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 TOPORSQ9NS56 1045 aaPredicted RBP22.2■■□□□ 1.14
CTSA-206ENST00000480961 MAPK8IP1Q9UQF2 711 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 MTCH2Q9Y6C9 303 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 EYSQ5T1H1 3165 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 SMIM28A0A1B0GU29 152 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 GOLGA8IPA6NC78 632 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 CASTOR2A6NHX0 329 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 GOLGA8JA6NMD2 632 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 NRP1O14786 923 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 RHOBTB3O94955 611 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 ALDH2P05091 517 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 THP07101 528 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 DSC1Q08554 894 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 GRIK3Q13003 919 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 PSMD2Q13200 908 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 ENOX2Q16206 610 aaKnown RBP22.19■■□□□ 1.14
CTSA-206ENST00000480961 TMEM130Q8N3G9 435 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 POF1BQ8WVV4 589 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 P2RX5Q93086 422 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 PAAF1Q9BRP4 392 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 FAM213AQ9BRX8 229 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 LMBRD1Q9NUN5 540 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 FAN1Q9Y2M0 1017 aa22.19■■□□□ 1.14
CTSA-206ENST00000480961 FNDC1Q4ZHG4 1894 aaPredicted RBP22.19■■□□□ 1.14
CTSA-206ENST00000480961 LACTBL1A8MY62 500 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 CLIC2O15247 247 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 TGFB1I1O43294 461 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 CAMK1Q14012 370 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 NAB2Q15742 525 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 XKR4Q5GH76 650 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 ISM2Q6H9L7 571 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 SMYD4Q8IYR2 804 aaPredicted RBP22.18■■□□□ 1.14
CTSA-206ENST00000480961 C18orf25Q96B23 403 aaPredicted RBP22.18■■□□□ 1.14
CTSA-206ENST00000480961 RPF1Q9H9Y2 349 aaKnown RBP22.18■■□□□ 1.14
CTSA-206ENST00000480961 CPSF3Q9UKF6 684 aaKnown RBP22.18■■□□□ 1.14
CTSA-206ENST00000480961 PCDHGC5Q9Y5F6 944 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 PCDHA5Q9Y5H7 936 aa22.18■■□□□ 1.14
CTSA-206ENST00000480961 IRS1P35568 1242 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 KCNB1Q14721 858 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 CAMK4Q16566 473 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 BMT2Q1RMZ1 405 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 ARMCX5Q6P1M9 558 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 CRELD2Q6UXH1 353 aaPredicted RBP22.17■■□□□ 1.14
CTSA-206ENST00000480961 SMARCE1Q969G3 411 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 IGSF21Q96ID5 467 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 PPP1R10Q96QC0 940 aaKnown RBP22.17■■□□□ 1.14
CTSA-206ENST00000480961 TMEM175Q9BSA9 504 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 GOLGA2P5Q9HBQ8 144 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 AGPAT3Q9NRZ7 376 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 CNTN3Q9P232 1028 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 HOOK1Q9UJC3 728 aaKnown RBP22.17■■□□□ 1.14
CTSA-206ENST00000480961 STXBP5LQ9Y2K9 1186 aa22.17■■□□□ 1.14
CTSA-206ENST00000480961 UBE4BO95155 1302 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 SMC2O95347 1197 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 KCNE1P15382 129 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 GARTP22102 1010 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 IGFBP6P24592 240 aaPredicted RBP22.16■■□□□ 1.14
CTSA-206ENST00000480961 PPM1AP35813 382 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 ERVFC1P60507 584 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 KRT17Q04695 432 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 SOX4Q06945 474 aaPredicted RBP22.16■■□□□ 1.14
CTSA-206ENST00000480961 TUSC3Q13454 348 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 KNOP1Q1ED39 458 aaKnown RBP22.16■■□□□ 1.14
CTSA-206ENST00000480961 MRPL38Q96DV4 380 aaKnown RBP22.16■■□□□ 1.14
CTSA-206ENST00000480961 TMEM169Q96HH4 297 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 MARCH5Q9NX47 278 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 COL6A3P12111 3177 aa22.16■■□□□ 1.14
CTSA-206ENST00000480961 MYO9BQ13459 2157 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 TTC26A0AVF1 554 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 CYP2J2P51589 502 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 PLCB3Q01970 1234 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 KYAT1Q16773 422 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 PTPROQ16827 1216 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 MICAL1Q8TDZ2 1067 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 HASPINQ8TF76 798 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 KIF12Q96FN5 646 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 VN1R3Q9BXE9 311 aa22.15■■□□□ 1.14
CTSA-206ENST00000480961 POU3F3P20264 500 aaPredicted RBP22.14■■□□□ 1.13
CTSA-206ENST00000480961 GUCY2FP51841 1108 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 PPP2R3AQ06190 1150 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 HS2ST1Q7LGA3 356 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 TAS1R1Q7RTX1 841 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 MAFAQ8NHW3 353 aaPredicted RBP22.14■■□□□ 1.13
CTSA-206ENST00000480961 COLEC11Q9BWP8 271 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 PLEKHA5Q9HAU0 1116 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 RMND1Q9NWS8 449 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 HSPBP1Q9NZL4 362 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 TUBGCP4Q9UGJ1 667 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 PUF60Q9UHX1 559 aaKnown RBP22.14■■□□□ 1.13
CTSA-206ENST00000480961 REV3LO60673 3130 aa22.14■■□□□ 1.13
CTSA-206ENST00000480961 BIN1O00499 593 aa22.13■■□□□ 1.13
CTSA-206ENST00000480961 EXTL3O43909 919 aa22.13■■□□□ 1.13
CTSA-206ENST00000480961 CLCNKBP51801 687 aa22.13■■□□□ 1.13
CTSA-206ENST00000480961 WNT7BP56706 349 aa22.13■■□□□ 1.13
CTSA-206ENST00000480961 HSP90AA2PQ14568 343 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms