RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ETNK2Q9NVF9 386 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 TTC7AQ9ULT0 858 aaPredicted RBP11.6□□□□□ -0.55
CHD6-208ENST00000480022 FOCADQ5VW36 1801 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 CDK5RAP2Q96SN8 1893 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 hCG_2014768A0A024R1R8 64 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 MAP3K7O43318 606 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 NOL4O94818 638 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 ZCCHC18P0CG32 403 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 FGFR4P22455 802 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 CCNFP41002 786 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 RTP1P59025 263 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 SLC34A1Q06495 639 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 GABPAQ06546 454 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 AP1B1Q10567 949 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 CBX3Q13185 183 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 ZNF449Q6P9G9 518 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 C4orf50Q6ZRC1 276 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 KIAA0895Q8NCT3 520 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 LENG1Q96BZ8 264 aaPredicted RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 PPP1R14BQ96C90 147 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 DDX50Q9BQ39 737 aaKnown RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 LSM14BQ9BX40 385 aaKnown RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 CHMP2BQ9UQN3 213 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 CHKBQ9Y259 395 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 STXBP5LQ9Y2K9 1186 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 ROBO3Q96MS0 1386 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 NAV1Q8NEY1 1877 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 PASKQ96RG2 1323 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 TRAF5O00463 557 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 TRAFD1O14545 582 aaPredicted RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 KIAA0391O15091 583 aaKnown RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 DCTN3O75935 186 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 ITGA2BP08514 1039 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 ETS2P15036 469 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 CREB1P16220 341 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 DHX34Q14147 1143 aaKnown RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 FAM47EQ6ZV65 393 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 SYCE1Q8N0S2 351 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 ZBTB8BQ8NAP8 495 aaPredicted RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 SLC44A5Q8NCS7 719 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 CDCA5Q96FF9 252 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 ZNF184Q99676 751 aaPredicted RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 C7orf25Q9BPX7 421 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 TLE6Q9H808 572 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 DNAJC18Q9H819 358 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 IL1RAPL1Q9NZN1 696 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 FAM196BA6NMK8 535 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 CAPN9O14815 690 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 PLEKHA8P1O95397 391 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 T-ENOLP0DO92 83 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 PTPN4P29074 926 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 CDK7P50613 346 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 SLFN11Q7Z7L1 901 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 JAMLQ86YT9 394 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 FAM133AQ8N9E0 248 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 ESR2Q92731 530 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 METTL14Q9HCE5 456 aaKnown RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 PAIP2BQ9ULR5 123 aaKnown RBP11.59□□□□□ -0.55
CHD6-208ENST00000480022 NR2E1Q9Y466 385 aa11.59□□□□□ -0.55
CHD6-208ENST00000480022 GH1P01241 217 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 SUPT20HL1Q3ZLR7 823 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 HS2ST1Q7LGA3 356 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 LRRC15Q8TF66 581 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 GLG1Q92896 1179 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 ZNF653Q96CK0 615 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 RUNDC3BQ96NL0 473 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 ASCC2Q9H1I8 757 aaPredicted RBP11.58□□□□□ -0.56
CHD6-208ENST00000480022 METTL5Q9NRN9 209 aaKnown RBP11.58□□□□□ -0.56
CHD6-208ENST00000480022 HSFX1Q9UBD0 423 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 PARP2Q9UGN5 583 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 SSC5DA1L4H1 1573 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.58□□□□□ -0.56
CHD6-208ENST00000480022 TBC1D12O60347 775 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 RARGP13631 454 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 PAX3P23760 479 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 CDK8P49336 464 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 MAP3K10Q02779 954 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 LONRF1Q17RB8 773 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 ZFYVE27Q5T4F4 411 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 ARHGEF18Q6ZSZ5 1173 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 NT5DC3Q86UY8 548 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 HPS3Q969F9 1004 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 SERPINB12Q96P63 405 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 TRAIPQ9BWF2 469 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 NT5C3AQ9H0P0 336 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 DDX43Q9NXZ2 648 aaKnown RBP11.58□□□□□ -0.56
CHD6-208ENST00000480022 GRHL1Q9NZI5 618 aa11.58□□□□□ -0.56
CHD6-208ENST00000480022 HERC5Q9UII4 1024 aaKnown RBP11.58□□□□□ -0.56
CHD6-208ENST00000480022 TNKSO95271 1327 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 KRT36O76013 467 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 CBX6O95503 412 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
CHD6-208ENST00000480022 HNRNPCP07910 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD6-208ENST00000480022 FGRP09769 529 aa11.57□□□□□ -0.56
CHD6-208ENST00000480022 ZNF24P17028 368 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms