RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 GMEB2Q9UKD1 530 aa19.06■□□□□ 0.64
VIM-204ENST00000478746 ZMYM2Q9UBW7 1377 aa19.06■□□□□ 0.64
VIM-204ENST00000478746 A0A1B0GUA9 196 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 CASTOR2A6NHX0 329 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 TBX3O15119 743 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 ADAM12O43184 909 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 GCFC2P16383 781 aaKnown RBP19.05■□□□□ 0.64
VIM-204ENST00000478746 CYP4A11Q02928 519 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 CAPSQ13938 189 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 NPAS3Q8IXF0 933 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 FAM177A1Q8N128 213 aaPredicted RBP19.05■□□□□ 0.64
VIM-204ENST00000478746 ING5Q8WYH8 240 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 HAS1Q92839 578 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 NFKBIZQ9BYH8 718 aa19.05■□□□□ 0.64
VIM-204ENST00000478746 CCDC194A0A1B0GVG4 234 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 CPLX1O14810 134 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 CCNT1O60563 726 aaKnown RBP19.04■□□□□ 0.64
VIM-204ENST00000478746 ECI2O75521 394 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 KIF4AO95239 1232 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 POU2F2P09086 479 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 OR1D2P34982 312 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 ARL2P36404 184 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 ADCY1Q08828 1119 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 ELAVL2Q12926 359 aaKnown RBP19.04■□□□□ 0.64
VIM-204ENST00000478746 FZD5Q13467 585 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 RAB33AQ14088 237 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 NEK8Q86SG6 692 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 MCRS1Q96EZ8 462 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 AIFM3Q96NN9 605 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 PLA2G2FQ9BZM2 168 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 PARD6AQ9NPB6 346 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 PRMT8Q9NR22 394 aaPredicted RBP19.04■□□□□ 0.64
VIM-204ENST00000478746 HEBP1Q9NRV9 189 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 RAB23Q9ULC3 237 aa19.04■□□□□ 0.64
VIM-204ENST00000478746 MRPS23Q9Y3D9 190 aaKnown RBP19.04■□□□□ 0.64
VIM-204ENST00000478746 CDC45O75419 566 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 SLITRK3O94933 977 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 BAG4O95429 457 aaKnown RBP19.03■□□□□ 0.64
VIM-204ENST00000478746 THP07101 528 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 ADRB1P08588 477 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 GLRA2P23416 452 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 PSMA5P28066 241 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 HSPA4P34932 840 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 NRLP54845 237 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 MTAPQ13126 283 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 ST3GAL2Q16842 350 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 RTL10Q7L3V2 364 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 GDE1Q9NZC3 331 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 KCNJ14Q9UNX9 436 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 NOTCH4Q99466 2003 aa19.03■□□□□ 0.64
VIM-204ENST00000478746 DGAT1O75907 488 aa19.02■□□□□ 0.64
VIM-204ENST00000478746 SPEM2Q0P670 501 aa19.02■□□□□ 0.64
VIM-204ENST00000478746 SLFN12Q8IYM2 578 aa19.02■□□□□ 0.64
VIM-204ENST00000478746 NAP1L4Q99733 375 aaKnown RBP19.02■□□□□ 0.64
VIM-204ENST00000478746 ANKEF1Q9NU02 776 aa19.02■□□□□ 0.64
VIM-204ENST00000478746 PPP2R5DQ14738 602 aa19.01■□□□□ 0.63
VIM-204ENST00000478746 LPAL2Q16609 132 aa19.01■□□□□ 0.63
VIM-204ENST00000478746 TANGO2Q6ICL3 276 aa19.01■□□□□ 0.63
VIM-204ENST00000478746 CPLX2Q6PUV4 134 aaKnown RBP19.01■□□□□ 0.63
VIM-204ENST00000478746 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.01■□□□□ 0.63
VIM-204ENST00000478746 CELF5Q8N6W0 485 aaKnown RBP19.01■□□□□ 0.63
VIM-204ENST00000478746 CHAMP1Q96JM3 812 aa19.01■□□□□ 0.63
VIM-204ENST00000478746 CCDC43Q96MW1 224 aaKnown RBP19.01■□□□□ 0.63
VIM-204ENST00000478746 EIF2AK1Q9BQI3 630 aaKnown RBP19.01■□□□□ 0.63
VIM-204ENST00000478746 NDRG2Q9UN36 371 aaKnown RBP19.01■□□□□ 0.63
VIM-204ENST00000478746 ARID2Q68CP9 1835 aa19.01■□□□□ 0.63
VIM-204ENST00000478746 MAP1BP46821 2468 aaKnown RBP19.01■□□□□ 0.63
VIM-204ENST00000478746 MAN2B1O00754 1011 aa19■□□□□ 0.63
VIM-204ENST00000478746 PTGESO14684 152 aa19■□□□□ 0.63
VIM-204ENST00000478746 RHOP08100 348 aa19■□□□□ 0.63
VIM-204ENST00000478746 SPIRE1Q08AE8 756 aa19■□□□□ 0.63
VIM-204ENST00000478746 LAIR1Q6GTX8 287 aa19■□□□□ 0.63
VIM-204ENST00000478746 SKAP1Q86WV1 359 aa19■□□□□ 0.63
VIM-204ENST00000478746 POTEDQ86YR6 584 aa19■□□□□ 0.63
VIM-204ENST00000478746 ELSPBP1Q96BH3 223 aa19■□□□□ 0.63
VIM-204ENST00000478746 POLR3FQ9H1D9 316 aaPredicted RBP19■□□□□ 0.63
VIM-204ENST00000478746 PRMT7Q9NVM4 692 aaPredicted RBP19■□□□□ 0.63
VIM-204ENST00000478746 SNTG2Q9NY99 539 aa19■□□□□ 0.63
VIM-204ENST00000478746 DYNC1LI1Q9Y6G9 523 aaKnown RBP19■□□□□ 0.63
VIM-204ENST00000478746 CHD8Q9HCK8 2581 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 LRRIQ4A6NIV6 560 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 SHISA7A6NL88 538 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 LYPLA2O95372 231 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 PTPN2P17706 415 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 FGFR3P22607 806 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 TOB2Q14106 344 aaPredicted RBP18.99■□□□□ 0.63
VIM-204ENST00000478746 SLC5A9Q2M3M2 681 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 PPM1JQ5JR12 505 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 MAMSTRQ6ZN01 415 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 PIK3AP1Q6ZUJ8 805 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 NETO1Q8TDF5 533 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 DNASE1L2Q92874 299 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 ZNF274Q96GC6 653 aaPredicted RBP18.99■□□□□ 0.63
VIM-204ENST00000478746 PRIMPOLQ96LW4 560 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 HSD17B14Q9BPX1 270 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 CHRDQ9H2X0 955 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 BRD9Q9H8M2 597 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 MTRRQ9UBK8 725 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 CDY1Q9Y6F8 540 aa18.99■□□□□ 0.63
VIM-204ENST00000478746 F5P12259 2224 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms