RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 KNOP1Q1ED39 458 aaKnown RBP29.21■■■□□ 2.27
CCM2-211ENST00000478582 SPOUT1Q5T280 376 aaKnown RBP29.21■■■□□ 2.27
CCM2-211ENST00000478582 KLHL23Q8NBE8 558 aa29.21■■■□□ 2.27
CCM2-211ENST00000478582 POMGNT1Q8WZA1 660 aa29.21■■■□□ 2.27
CCM2-211ENST00000478582 GTPBP4Q9BZE4 634 aaKnown RBP29.21■■■□□ 2.27
CCM2-211ENST00000478582 NSUN3Q9H649 340 aaKnown RBP29.21■■■□□ 2.27
CCM2-211ENST00000478582 HCSTQ9UBK5 93 aa29.21■■■□□ 2.27
CCM2-211ENST00000478582 CARNS1A5YM72 827 aa29.2■■■□□ 2.26
CCM2-211ENST00000478582 TGFB1I1O43294 461 aa29.2■■■□□ 2.26
CCM2-211ENST00000478582 ITGB1P05556 798 aa29.2■■■□□ 2.26
CCM2-211ENST00000478582 SCNN1GP51170 649 aa29.2■■■□□ 2.26
CCM2-211ENST00000478582 POU5F1Q01860 360 aaKnown RBP29.2■■■□□ 2.26
CCM2-211ENST00000478582 SPPL3Q8TCT6 385 aa29.2■■■□□ 2.26
CCM2-211ENST00000478582 ERCC4Q92889 916 aaPredicted RBP29.2■■■□□ 2.26
CCM2-211ENST00000478582 RPS6KC1Q96S38 1066 aa29.2■■■□□ 2.26
CCM2-211ENST00000478582 NRDE2Q9H7Z3 1164 aa29.2■■■□□ 2.26
CCM2-211ENST00000478582 CGNQ9P2M7 1197 aaKnown RBP29.2■■■□□ 2.26
CCM2-211ENST00000478582 AGO2Q9UKV8 859 aaKnown RBP29.2■■■□□ 2.26
CCM2-211ENST00000478582 PCDHB12Q9Y5F1 795 aa29.2■■■□□ 2.26
CCM2-211ENST00000478582 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.19■■■□□ 2.26
CCM2-211ENST00000478582 PTGESO14684 152 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 KIAA0391O15091 583 aaKnown RBP29.19■■■□□ 2.26
CCM2-211ENST00000478582 KIF20AO95235 890 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 POMCP01189 267 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 RNASELQ05823 741 aaKnown RBP29.19■■■□□ 2.26
CCM2-211ENST00000478582 GRIK3Q13003 919 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 SLC10A6Q3KNW5 377 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 SEZ6Q53EL9 994 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 TCEAL5Q5H9L2 206 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 ZNF280BQ86YH2 543 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 NELFCDQ8IXH7 590 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 COLGALT1Q8NBJ5 622 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 SNX27Q96L92 541 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 PLEKHA5Q9HAU0 1116 aa29.19■■■□□ 2.26
CCM2-211ENST00000478582 CPSF3Q9UKF6 684 aaKnown RBP29.19■■■□□ 2.26
CCM2-211ENST00000478582 MYO7AQ13402 2215 aa29.18■■■□□ 2.26
CCM2-211ENST00000478582 MEFVO15553 781 aaPredicted RBP29.18■■■□□ 2.26
CCM2-211ENST00000478582 DDHD2O94830 711 aa29.18■■■□□ 2.26
CCM2-211ENST00000478582 ADRB2P07550 413 aa29.18■■■□□ 2.26
CCM2-211ENST00000478582 BMP1P13497 986 aa29.18■■■□□ 2.26
CCM2-211ENST00000478582 DSC1Q08554 894 aa29.18■■■□□ 2.26
CCM2-211ENST00000478582 CAMK1Q14012 370 aa29.18■■■□□ 2.26
CCM2-211ENST00000478582 GUF1Q8N442 669 aaKnown RBP29.18■■■□□ 2.26
CCM2-211ENST00000478582 CXCL16Q9H2A7 254 aa29.18■■■□□ 2.26
CCM2-211ENST00000478582 UBE2ZQ9H832 354 aaPredicted RBP29.18■■■□□ 2.26
CCM2-211ENST00000478582 LDHAP00338 332 aaKnown RBP29.17■■■□□ 2.26
CCM2-211ENST00000478582 TNFSF9P41273 254 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 KCNQ1P51787 676 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 COBLL1Q53SF7 1204 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 ZBTB41Q5SVQ8 909 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 ZNF658Q5TYW1 1059 aaPredicted RBP29.17■■■□□ 2.26
CCM2-211ENST00000478582 ARMCX5Q6P1M9 558 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 KCNT2Q6UVM3 1135 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 HS2ST1Q7LGA3 356 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 ZNF558Q96NG5 402 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 FAM193BQ96PV7 902 aaPredicted RBP29.17■■■□□ 2.26
CCM2-211ENST00000478582 CBWD1Q9BRT8 395 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 TMEM175Q9BSA9 504 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 KCTD10Q9H3F6 313 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 CLSTN2Q9H4D0 955 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 AGPAT3Q9NRZ7 376 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 CNTN3Q9P232 1028 aa29.17■■■□□ 2.26
CCM2-211ENST00000478582 TTC26A0AVF1 554 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 THP07101 528 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 KCNE1P15382 129 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 DNAJB1P25685 340 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 CRELD2Q6UXH1 353 aaPredicted RBP29.16■■■□□ 2.26
CCM2-211ENST00000478582 C12orf56Q8IXR9 622 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 COLGALT2Q8IYK4 626 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 GOLGA5Q8TBA6 731 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 GPT2Q8TD30 523 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 TMEM174Q8WUU8 243 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 POF1BQ8WVV4 589 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 ATG2AQ2TAZ0 1938 aa29.16■■■□□ 2.26
CCM2-211ENST00000478582 SMIM28A0A1B0GU29 152 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 PDXKO00764 312 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 B4GALT3O60512 393 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 GALTP07902 379 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 ALDH7A1P49419 539 aaKnown RBP29.15■■■□□ 2.26
CCM2-211ENST00000478582 BCAR1P56945 870 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 NAB2Q15742 525 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 ENOX2Q16206 610 aaKnown RBP29.15■■■□□ 2.26
CCM2-211ENST00000478582 CD302Q8IX05 232 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 PPP1R10Q96QC0 940 aaKnown RBP29.15■■■□□ 2.26
CCM2-211ENST00000478582 TSPAN18Q96SJ8 248 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 RPF1Q9H9Y2 349 aaKnown RBP29.15■■■□□ 2.26
CCM2-211ENST00000478582 DNAJB4Q9UDY4 337 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 MAN1B1Q9UKM7 699 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 BRWD1Q9NSI6 2320 aa29.15■■■□□ 2.26
CCM2-211ENST00000478582 CUL9Q8IWT3 2517 aa29.14■■■□□ 2.26
CCM2-211ENST00000478582 ZC3H11AO75152 810 aaKnown RBP eCLIP29.14■■■□□ 2.26
CCM2-211ENST00000478582 CXCL8P10145 99 aa29.14■■■□□ 2.26
CCM2-211ENST00000478582 MCM4P33991 863 aa29.14■■■□□ 2.26
CCM2-211ENST00000478582 ACOT2P49753 483 aa29.14■■■□□ 2.26
CCM2-211ENST00000478582 UBE3AQ05086 875 aa29.14■■■□□ 2.26
CCM2-211ENST00000478582 CAMK4Q16566 473 aa29.14■■■□□ 2.26
CCM2-211ENST00000478582 ADAMTS19Q8TE59 1207 aa29.14■■■□□ 2.26
CCM2-211ENST00000478582 KIAA1468Q9P260 1216 aa29.14■■■□□ 2.26
CCM2-211ENST00000478582 TCF20Q9UGU0 1960 aaKnown RBP29.13■■■□□ 2.25
CCM2-211ENST00000478582 PLXNA4Q9HCM2 1894 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms