RNA–Protein interactions for RNA: ENST00000478101.1

CCDC146-208, Transcript of coiled-coil domain containing 146, human

TSL 3

Gene CCDC146, Length 726 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC146-208	ENST00000478101	CGNL1	Q0VF96	1302 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	ZEB2	O60315	1214 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	STC2	O76061	302 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	ALDH1A2	O94788	518 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	CLSTN1	O94985	981 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	LY86	O95711	162 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	C6	P13671	934 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	CNGA1	P29973	690 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	SOX5	P35711	763 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	MANF	P55145	182 aa	Known RBP	4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	NPEPPS	P55786	919 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	SLFN5	Q08AF3	891 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	MGAT5	Q09328	741 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	FAM214A	Q32MH5	1076 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	GAGE13	Q4V321	117 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	PITRM1	Q5JRX3	1037 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	RNF207	Q6ZRF8	634 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	ARL8A	Q96BM9	186 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	EAF2	Q96CJ1	260 aa	Predicted RBP	4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	ZNF341	Q9BYN7	854 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	CSRNP2	Q9H175	543 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	VPS11	Q9H270	941 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	MSL2	Q9HCI7	577 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	VTA1	Q9NP79	307 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	EVL	Q9UI08	416 aa	Predicted RBP	4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	PRSS50	Q9UI38	385 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	TRPC5	Q9UL62	973 aa	Predicted RBP	4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	NUMBL	Q9Y6R0	609 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	RIMS2	Q9UQ26	1411 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	ABCC11	Q96J66	1382 aa		4.26	□□□□□ -1.73
CCDC146-208	ENST00000478101	EP400	Q96L91	3159 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	NRXN3	Q9Y4C0	1643 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	CFB	P00751	764 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	XPA	P23025	273 aa	Predicted RBP	4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	CASR	P41180	1078 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	SCNN1G	P51170	649 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	LGALS4	P56470	323 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	FOXE3	Q13461	319 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	ELAVL1	Q15717	326 aa	Known RBP	4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	FKBP15	Q5T1M5	1219 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	LMBR1L	Q6UX01	489 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	LHFPL2	Q6ZUX7	228 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	KNDC1	Q76NI1	1749 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	MORC1	Q86VD1	984 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	GSPT2	Q8IYD1	628 aa	Known RBP	4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	CMTM4	Q8IZR5	234 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101		Q8N1X5	172 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	MSL3	Q8N5Y2	521 aa	Known RBP	4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	IL17D	Q8TAD2	202 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	PPP1R14C	Q8TAE6	165 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	TGFBRAP1	Q8WUH2	860 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	PGBD4	Q96DM1	585 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	ZNF512	Q96ME7	567 aa	Predicted RBP	4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	KCTD10	Q9H3F6	313 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	STK26	Q9P289	416 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	HS3ST3A1	Q9Y663	406 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	EID1	Q9Y6B2	187 aa		4.25	□□□□□ -1.73
CCDC146-208	ENST00000478101	CD163L1	Q9NR16	1453 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	UBR1	Q8IWV7	1749 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	NPIPB8	E9PQR5	432 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	SEC24D	O94855	1032 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	C1S	P09871	688 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	TACR2	P21452	398 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	ACRV1	P26436	265 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	SCAND1	P57086	179 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	SESN3	P58005	492 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	TMPRSS15	P98073	1019 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	CRHR2	Q13324	411 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	RRP1B	Q14684	758 aa	Known RBP	4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	STAT4	Q14765	748 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	UBE3C	Q15386	1083 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	UGT8	Q16880	541 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	CRIP3	Q6Q6R5	217 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101		Q6ZRM9	215 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	AFAP1L2	Q8N4X5	818 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	MB21D1	Q8N884	522 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	OR5M3	Q8NGP4	307 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	OR14C36	Q8NHC7	312 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	LRRC59	Q96AG4	307 aa	Known RBP	4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	PLEKHG4B	Q96PX9	1271 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	PRAM1	Q96QH2	718 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	EPC1	Q9H2F5	836 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	GIT1	Q9Y2X7	761 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	ZNF142	P52746	1687 aa	Predicted RBP	4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101		A0A1W2PP64	1363 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	MSH6	P52701	1360 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	NLRP1	Q9C000	1473 aa		4.24	□□□□□ -1.73
CCDC146-208	ENST00000478101	KIF20B	Q96Q89	1820 aa		4.23	□□□□□ -1.73
CCDC146-208	ENST00000478101	UTRN	P46939	3433 aa		4.23	□□□□□ -1.73
CCDC146-208	ENST00000478101	TECPR2	O15040	1411 aa		4.23	□□□□□ -1.73
CCDC146-208	ENST00000478101	STRCP1	A6NGW2	1772 aa		4.23	□□□□□ -1.73
CCDC146-208	ENST00000478101		A0A1W2PR48	441 aa		4.23	□□□□□ -1.73
CCDC146-208	ENST00000478101	GOLGA8A	A7E2F4	631 aa		4.23	□□□□□ -1.73
CCDC146-208	ENST00000478101	APAF1	O14727	1248 aa		4.23	□□□□□ -1.73
CCDC146-208	ENST00000478101	NRP2	O60462	931 aa		4.23	□□□□□ -1.73
CCDC146-208	ENST00000478101	PRAMEF4	O60810	478 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms