RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CYLC1P35663 651 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 ASPAP45381 313 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 ACOT2P49753 483 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 MXI1P50539 228 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 PTP4A2Q12974 167 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 C10orf76Q5T2E6 689 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 SLC20A1Q8WUM9 679 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 BCO2Q9BYV7 579 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 LRRIQ4A6NIV6 560 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 LDHAP00338 332 aaKnown RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 FERP16591 822 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 APLP1P51693 650 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 RHPN2Q8IUC4 686 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 CREBRFQ8IUR6 639 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 KIF18AQ8NI77 898 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 DEPTORQ8TB45 409 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 ARID3AQ99856 593 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 GRID2IPA4D2P6 1211 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 NPTXRO95502 500 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 ATP1A1P05023 1023 aaKnown RBP13.11□□□□□ -0.31
PRPF39-203ENST00000477626 ZSCAN20P17040 1043 aaPredicted RBP13.11□□□□□ -0.31
PRPF39-203ENST00000477626 MAP2K1Q02750 393 aaPredicted RBP13.11□□□□□ -0.31
PRPF39-203ENST00000477626 MFSD10Q14728 455 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 ASIC2Q16515 512 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 VTI1AQ96AJ9 217 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 TLR10Q9BXR5 811 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 RNF186Q9NXI6 227 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 COG5Q9UP83 839 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 A0A087WZ62 844 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 ANO9A1A5B4 782 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 MCF2P10911 925 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 LIG4P49917 911 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 HTRA3P83110 453 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 TRMT1LQ7Z2T5 733 aaKnown RBP13.11□□□□□ -0.31
PRPF39-203ENST00000477626 CEP120Q8N960 986 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 FDXACB1Q9BRP7 624 aaPredicted RBP13.11□□□□□ -0.31
PRPF39-203ENST00000477626 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
PRPF39-203ENST00000477626 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
PRPF39-203ENST00000477626 CYP1A1P04798 512 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-203ENST00000477626 PRKCZQ05513 592 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 CACNB2Q08289 660 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-203ENST00000477626 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 ATF7IP2Q5U623 682 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 SLC43A3Q8NBI5 491 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 ZNF215Q9UL58 517 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-203ENST00000477626 NME7Q9Y5B8 376 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 VTNP04004 478 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 STAT1P42224 750 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-203ENST00000477626 PCBP1Q15365 356 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRPF39-203ENST00000477626 SRGAP1Q7Z6B7 1085 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 ELMO3Q96BJ8 720 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
PRPF39-203ENST00000477626 TSGA10Q9BZW7 698 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-203ENST00000477626 FAM53CQ9NYF3 392 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 PSEN2P49810 448 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 SLC47A2Q86VL8 602 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 CCDC42Q96M95 316 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 SETD4Q9NVD3 440 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 TMEM59LQ9UK28 342 aa13.1□□□□□ -0.31
PRPF39-203ENST00000477626 SGPL1O95470 568 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 STRN3Q13033 797 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 KIAA0753Q2KHM9 967 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 SEZ6Q53EL9 994 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 CD101Q93033 1021 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 ADAMTS1Q9UHI8 967 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 PDE2AO00408 941 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-203ENST00000477626 HLA-DRAP01903 254 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 MAPK6Q16659 721 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 WHAMMQ8TF30 809 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 DHX38Q92620 1227 aaKnown RBP13.09□□□□□ -0.31
PRPF39-203ENST00000477626 OSBPL7Q9BZF2 842 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 ACP6Q9NPH0 428 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 UQCRHLA0A096LP55 91 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 DYNC1I1O14576 645 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 UQCRHP07919 91 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 KRT13P13646 458 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 CDH5P33151 784 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-203ENST00000477626 CPT1AP50416 773 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 ZNF200P98182 395 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-203ENST00000477626 KLHL30Q0D2K2 578 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 NOGQ13253 232 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 AGPAT1Q99943 283 aa13.09□□□□□ -0.31
PRPF39-203ENST00000477626 UBE2TQ9NPD8 197 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 1220.8 ms