RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LTA4HP09960 611 aaKnown RBP3.88□□□□□ -1.79
XRN1-211ENST00000477237 PRR23D2P0DMB1 279 aaPredicted RBP3.88□□□□□ -1.79
XRN1-211ENST00000477237 FGFR4P22455 802 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 TUBA4AP68366 448 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 CYP2A13Q16696 494 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 ZBTB41Q5SVQ8 909 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 TSTD2Q5T7W7 516 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 FCRLBQ6BAA4 426 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 AWAT2Q6E213 333 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 LMBR1LQ6UX01 489 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 MED25Q71SY5 747 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 AMIGO2Q86SJ2 522 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 FAM43AQ8N2R8 423 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 ZSWIM2Q8NEG5 633 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 SRPK1Q96SB4 655 aaKnown RBP3.88□□□□□ -1.79
XRN1-211ENST00000477237 TANGO6Q9C0B7 1094 aa3.88□□□□□ -1.79
XRN1-211ENST00000477237 PRAMEF4O60810 478 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 XPAP23025 273 aaPredicted RBP3.87□□□□□ -1.79
XRN1-211ENST00000477237 KELP23276 732 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 IGFALSP35858 605 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 FOLR3P41439 243 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 RAPGEF1Q13905 1077 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 RASA3Q14644 834 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 LLGL1Q15334 1064 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 PRAMEF14Q5SWL7 426 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 ABHD15Q6UXT9 468 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 SNTG2Q9NY99 539 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 SPO11Q9Y5K1 396 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 PNPLA7Q6ZV29 1317 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 AATKQ6ZMQ8 1374 aa3.87□□□□□ -1.79
XRN1-211ENST00000477237 CCDC163A0A0D9SF12 145 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 PEX1O43933 1283 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 NRP2O60462 931 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 ELFN1P0C7U0 828 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 GPR15P49685 360 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 VAV2P52735 878 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 MAPK10P53779 464 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 CLRN1P58418 232 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 HSD11B2P80365 405 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 TFF2Q03403 129 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 ZNF460Q14592 562 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 NAALADL2Q58DX5 795 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 KIAA0895LQ68EN5 471 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 THNSL2Q86YJ6 484 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 ADAMTS15Q8TE58 950 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 SSH3Q8TE77 659 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 FUBP3Q96I24 572 aaKnown RBP eCLIP3.86□□□□□ -1.79
XRN1-211ENST00000477237 CLUHP3Q96NS8 147 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 BHMT2Q9H2M3 363 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 RNPEPQ9H4A4 650 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 NCOA5Q9HCD5 579 aaKnown RBP3.86□□□□□ -1.79
XRN1-211ENST00000477237 GPRC5DQ9NZD1 345 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 B4GALT6Q9UBX8 382 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 KCNE5Q9UJ90 142 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 ADAM21Q9UKJ8 722 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 PTCH2Q9Y6C5 1203 aa3.86□□□□□ -1.79
XRN1-211ENST00000477237 CCDC187A0A096LP49 1063 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 CXorf49A8MYA2 514 aaPredicted RBP3.85□□□□□ -1.79
XRN1-211ENST00000477237 PJA2O43164 708 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 TMEM127O75204 238 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 GPANK1O95872 356 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 FLT3LGP49771 235 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 NRG3P56975 720 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 GRM1Q13255 1194 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 CCDC178Q5BJE1 867 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 C19orf54Q5BKX5 351 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 ZNF782Q6ZMW2 699 aaPredicted RBP3.85□□□□□ -1.79
XRN1-211ENST00000477237 UBE2R2Q712K3 238 aaPredicted RBP3.85□□□□□ -1.79
XRN1-211ENST00000477237 PEG10Q86TG7 708 aaKnown RBP3.85□□□□□ -1.79
XRN1-211ENST00000477237 ZZZ3Q8IYH5 903 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 SAMD14Q8IZD0 417 aaPredicted RBP3.85□□□□□ -1.79
XRN1-211ENST00000477237 H2AFY2Q9P0M6 372 aaPredicted RBP3.85□□□□□ -1.79
XRN1-211ENST00000477237 USP25Q9UHP3 1055 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 TBC1D30Q9Y2I9 924 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 WNT6Q9Y6F9 365 aa3.85□□□□□ -1.79
XRN1-211ENST00000477237 ST20-MTHFSA0A0A6YYL1 179 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 LINC01548A6NM66 108 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 PLD2O14939 933 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 INSIG1O15503 277 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 ASLP04424 464 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 JMJD7P0C870 316 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 RAP2BP61225 183 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 SLC10A2Q12908 348 aaPredicted RBP3.84□□□□□ -1.79
XRN1-211ENST00000477237 MORN5Q5VZ52 161 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 SLC9A4Q6AI14 798 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 PDZD4Q76G19 769 aaPredicted RBP3.84□□□□□ -1.79
XRN1-211ENST00000477237 SEMA6DQ8NFY4 1073 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 SNX33Q8WV41 574 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 ZNF496Q96IT1 587 aaPredicted RBP3.84□□□□□ -1.79
XRN1-211ENST00000477237 REXO4Q9GZR2 422 aaKnown RBP3.84□□□□□ -1.79
XRN1-211ENST00000477237 OXSMQ9NWU1 459 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 EVLQ9UI08 416 aaPredicted RBP3.84□□□□□ -1.79
XRN1-211ENST00000477237 ZKSCAN5Q9Y2L8 839 aa3.84□□□□□ -1.79
XRN1-211ENST00000477237 WNT10BO00744 389 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 ADCY6O43306 1168 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 CD40P25942 277 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 CANXP27824 592 aaKnown RBP3.83□□□□□ -1.8
XRN1-211ENST00000477237 FLT3P36888 993 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 SREBF1P36956 1147 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 GRIA3P42263 894 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms