RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 KRT6CP48668 564 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 BCAP31P51572 246 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 NAA20P61599 178 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CLDN10P78369 228 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PLCB3Q01970 1234 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CDK18Q07002 472 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 GALNT1Q10472 559 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 RALGDSQ12967 914 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SQSTM1Q13501 440 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 NCAPHQ15003 741 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 STILQ15468 1287 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PARP6Q2NL67 630 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 KLHL38Q2WGJ6 581 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 GALNTL6Q49A17 601 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ZCWPW2Q504Y3 356 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SGO2Q562F6 1265 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 WASHC2DQ5SRD0 308 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 MAP3K21Q5TCX8 1036 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 LARP1Q6PKG0 1096 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 C4orf22Q6V702 233 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CCDC129Q6ZRS4 1044 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 UNC13DQ70J99 1090 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 INTS8Q75QN2 995 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 ASRGL1Q7L266 308 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SH3BP5LQ7L8J4 393 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 RASGRP2Q7LDG7 609 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PIGWQ7Z7B1 504 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 FMR1NBQ8N0W7 255 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 MMGT1Q8N4V1 131 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 LZTR1Q8N653 840 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 NATD1Q8N6N6 113 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 EXD1Q8NHP7 514 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ANGPTL6Q8NI99 470 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PYROXD1Q8WU10 500 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 NELFBQ8WX92 580 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 FERMT2Q96AC1 680 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 DGCR14Q96DF8 476 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 ACAP3Q96P50 834 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 RBM14Q96PK6 669 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 MMS19Q96T76 1030 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 DNAJC7Q99615 494 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 DHRS9Q9BPW9 319 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 STK33Q9BYT3 514 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 TMBIM4Q9HC24 238 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 NGRNQ9NPE2 291 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 FARSBQ9NSD9 589 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 NMRK1Q9NWW6 199 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 GIN1Q9NXP7 522 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 STK32BQ9NY57 414 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CXXC1Q9P0U4 656 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 SAMD15Q9P1V8 674 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 VANGL2Q9ULK5 521 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 USP20Q9Y2K6 914 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 COQ6Q9Y2Z9 468 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 TELO2Q9Y4R8 837 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 TRPM1Q7Z4N2 1603 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 EFCAB6Q5THR3 1501 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CEMIPQ8WUJ3 1361 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 GTPBP10A4D1E9 387 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 YKT6O15498 198 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 NBNO60934 754 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 UBOX5O94941 541 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 TFRCP02786 760 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 GZMAP12544 262 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ZKSCAN1P17029 563 aaPredicted RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 KCNA6P17658 529 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 HPDP32754 393 aaPredicted RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 CSTF2P33240 577 aaKnown RBP eCLIP4.4□□□□□ -1.7
CD55-208ENST00000476590 HOXD13P35453 343 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ADD2P35612 726 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 GNL1P36915 607 aaPredicted RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 HSD17B2P37059 387 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 UBA7P41226 1012 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 SLC1A1P43005 524 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 GATA4P43694 442 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 AK2P54819 239 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 MAP3K7CLP57077 242 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 FKBP4Q02790 459 aaKnown RBP eCLIP4.4□□□□□ -1.7
CD55-208ENST00000476590 GOLGA8FQ08AF8 430 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 GOLGA8DPQ0D2H9 430 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 KLHL30Q0D2K2 578 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 DNAJC3Q13217 504 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 MTX1Q13505 466 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 MAPRE2Q15555 327 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 DIXDC1Q155Q3 683 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 MOGQ16653 247 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 PHKG1Q16816 387 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 IGSF11Q5DX21 431 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 BTBD8Q5XKL5 378 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ANO1Q5XXA6 986 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 DENND2CQ68D51 928 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ZNF449Q6P9G9 518 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 LRIG3Q6UXM1 1119 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 SLC30A10Q6XR72 485 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ANKS3Q6ZW76 656 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 CYP4V2Q6ZWL3 525 aaPredicted RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 MIGA2Q7L4E1 593 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 SH3RF1Q7Z6J0 888 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 TMTC1Q8IUR5 882 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms