RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 MTAPQ13126 283 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 TUSC3Q13454 348 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 ST3GAL2Q16842 350 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 PABPC1LQ4VXU2 614 aaKnown RBP18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 AXDND1Q5T1B0 1012 aaPredicted RBP18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 GALNT17Q6IS24 598 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 ZNF852Q6ZMS4 543 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 KRT25Q7Z3Z0 450 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 FAM126AQ9BYI3 521 aaPredicted RBP18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 PLA2G2FQ9BZM2 168 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 ZSWIM4Q9H7M6 989 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 HEBP1Q9NRV9 189 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 A0A1B0GUA9 196 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 ECI2O75521 394 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 ARL2P36404 184 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 ADCY1Q08828 1119 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 UVSSAQ2YD98 709 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 NCAPH2Q6IBW4 605 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 PPP4R3AQ6IN85 833 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 AIFM3Q96NN9 605 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 NFKBIZQ9BYH8 718 aa18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 MRPS17Q9Y2R5 130 aaKnown RBP18.25■□□□□ 0.51
APOBEC3F-203ENST00000476513 CHD8Q9HCK8 2581 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 TBX3O15119 743 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 DEXIO95424 95 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 GCFC2P16383 781 aaKnown RBP18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 GLRA2P23416 452 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 OR1D2P34982 312 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 SPIRE1Q08AE8 756 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 SPEM2Q0P670 501 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 RAB33AQ14088 237 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 POTEHQ6S545 545 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 NEK8Q86SG6 692 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 SKAP1Q86WV1 359 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 TPH2Q8IWU9 490 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 MCRS1Q96EZ8 462 aa18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 MRPS23Q9Y3D9 190 aaKnown RBP18.24■□□□□ 0.51
APOBEC3F-203ENST00000476513 PTGESO14684 152 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 SLITRK3O94933 977 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 TDGF1P13385 188 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 HSPA4P34932 840 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 ELAVL2Q12926 359 aaKnown RBP18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 LPAL2Q16609 132 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 SLC5A9Q2M3M2 681 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 PDXDC1Q6P996 788 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 FAM177A1Q8N128 213 aaPredicted RBP18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 ZNF687Q8N1G0 1237 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 GDE1Q9NZC3 331 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 KCNJ14Q9UNX9 436 aa18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.23■□□□□ 0.51
APOBEC3F-203ENST00000476513 CCDC194A0A1B0GVG4 234 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 MARCH6O60337 910 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 CCNT1O60563 726 aaKnown RBP18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 CDC45O75419 566 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 RHOP08100 348 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 NAB2Q15742 525 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 PPM1JQ5JR12 505 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 TANGO2Q6ICL3 276 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 CXCL16Q9H2A7 254 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 CHRDQ9H2X0 955 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 RAB23Q9ULC3 237 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 NDRG2Q9UN36 371 aaKnown RBP18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 NOTCH4Q99466 2003 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 CACNA1GO43497 2377 aa18.22■□□□□ 0.51
APOBEC3F-203ENST00000476513 ZFHX4Q86UP3 3567 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 CPLX1O14810 134 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 SLC30A4O14863 429 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 DGAT1O75907 488 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 THP07101 528 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 FGFR3P22607 806 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 NRLP54845 237 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 LAIR1Q6GTX8 287 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 MAMSTRQ6ZN01 415 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 RTL10Q7L3V2 364 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 CELF5Q8N6W0 485 aaKnown RBP18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 NETO1Q8TDF5 533 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 DNASE1L2Q92874 299 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 ELSPBP1Q96BH3 223 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 POLR3FQ9H1D9 316 aaPredicted RBP18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 MTRRQ9UBK8 725 aa18.21■□□□□ 0.51
APOBEC3F-203ENST00000476513 F5P12259 2224 aa18.21■□□□□ 0.5
APOBEC3F-203ENST00000476513 LYPLA2O95372 231 aa18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 CEBPBP17676 345 aa18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 IGFBP6P24592 240 aaPredicted RBP18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 PSMA5P28066 241 aa18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 TOB2Q14106 344 aaPredicted RBP18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 HSD17B14Q9BPX1 270 aa18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 EIF2AK1Q9BQI3 630 aaKnown RBP18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 AVENQ9NQS1 362 aaPredicted RBP18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 ANKEF1Q9NU02 776 aa18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 SNTG2Q9NY99 539 aa18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 CDY1Q9Y6F8 540 aa18.2■□□□□ 0.5
APOBEC3F-203ENST00000476513 USP24Q9UPU5 2620 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 ARID2Q68CP9 1835 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 TTLL13PA6NNM8 815 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms