RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 STYXL1Q9Y6J8 313 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 A0A0B4J269 797 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 EFCAB14O75071 495 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 TOM1L1O75674 476 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 DGKIO75912 1065 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 UPP2O95045 317 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 NPTXRO95502 500 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 PDGFBP01127 241 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 FGFR1P11362 822 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 CD44P16070 742 aaKnown RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 SCN1AP35498 2009 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 WNT7BP56706 349 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 HTRA4P83105 476 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 MCL1Q07820 350 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 MORC3Q14149 939 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 PUM1Q14671 1186 aaKnown RBP eCLIP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 SMAD2Q15796 467 aaKnown RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 SEZ6Q53EL9 994 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 ISM2Q6H9L7 571 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 SLC27A1Q6PCB7 646 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 LRRC55Q6ZSA7 311 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 RBM43Q6ZSC3 357 aaKnown RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 FAM43BQ6ZT52 329 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 GVINP1Q7Z2Y8 2422 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 ZBTB33Q86T24 672 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 NLRC5Q86WI3 1866 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 NPAS4Q8IUM7 802 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 KIAA2013Q8IYS2 634 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 TMEM130Q8N3G9 435 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 ZNF689Q96CS4 500 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 HVCN1Q96D96 273 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 PABPC5Q96DU9 382 aaKnown RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 CCDC51Q96ER9 411 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 ASIC4Q96FT7 647 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 CASD1Q96PB1 797 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 GSDMAQ96QA5 445 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 MED15Q96RN5 788 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 POP1Q99575 1024 aaKnown RBP7.65□□□□□ -1.18
LIMD1-204ENST00000474665 KCTD10Q9H3F6 313 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 C1orf112Q9NSG2 853 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 EXOC1Q9NV70 894 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 TMEM161AQ9NX61 479 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 CLDND1Q9NY35 253 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 TMEM63CQ9P1W3 806 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 KIAA1468Q9P260 1216 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 KCNG1Q9UIX4 513 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 MAPK8IP1Q9UQF2 711 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 IPPQ9Y573 584 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 PCDHB13Q9Y5F0 798 aa7.65□□□□□ -1.18
LIMD1-204ENST00000474665 DNAH14Q0VDD8 3507 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 PPP1R3GB7ZBB8 358 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 H0YCG3 227 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 BIN1O00499 593 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 HNRNPDLO14979 420 aaKnown RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 N4BP3O15049 544 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 INPPL1O15357 1258 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 EIF3DO15371 548 aaKnown RBP eCLIP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 MBTPS2O43462 519 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 OFD1O75665 1012 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 EOMESO95936 686 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 AMHP03971 560 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ZSCAN20P17040 1043 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 IBSPP21815 317 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 SCP2P22307 547 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 AKAP5P24588 427 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 LTBRP36941 435 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 PRCPP42785 496 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 KCNJ6P48051 423 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 PMS1P54277 932 aaKnown RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ERVK-21P61565 698 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 SIGLEC14Q08ET2 396 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 STRN3Q13033 797 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 PSMD2Q13200 908 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ALCAMQ13740 583 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 KNOP1Q1ED39 458 aaKnown RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ZCWPW2Q504Y3 356 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 TCEAL5Q5H9L2 206 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 MPZL3Q6UWV2 235 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 CRELD2Q6UXH1 353 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ALKAL1Q6UXT8 129 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 NELFCDQ8IXH7 590 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 SP7Q8TDD2 431 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 SMARCE1Q969G3 411 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ZFP42Q96MM3 310 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ACCSQ96QU6 501 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 TGS1Q96RS0 853 aaKnown RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 CBWD1Q9BRT8 395 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ZBED2Q9BTP6 218 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 GZF1Q9H116 711 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ELAC1Q9H777 363 aaKnown RBP7.64□□□□□ -1.19
LIMD1-204ENST00000474665 MIOSQ9NXC5 875 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 SNTG2Q9NY99 539 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ANKFY1Q9P2R3 1169 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 PLAGL2Q9UPG8 496 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 ATG2AQ2TAZ0 1938 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 RALGAPA2Q2PPJ7 1873 aa7.64□□□□□ -1.19
LIMD1-204ENST00000474665 LINC01553A4QN01 128 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 GOLGA6L22H0YM25 854 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 PTGESO14684 152 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 RECQL4O94761 1208 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms