RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 MAP2K7O14733 419 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 TFRCP02786 760 aaKnown RBP23.4■■□□□ 1.34
CCM2-206ENST00000474617 FAM187BQ17R55 369 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 GLIPR1L2Q4G1C9 344 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 NT5DC3Q86UY8 548 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 RNF149Q8NC42 400 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.4■■□□□ 1.345e-8■■■■■ 65.3
CCM2-206ENST00000474617 POP1Q99575 1024 aaKnown RBP23.4■■□□□ 1.34
CCM2-206ENST00000474617 FUT8Q9BYC5 575 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 FZD8Q9H461 694 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 VIPAS39Q9H9C1 493 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 SUGCTQ9HAC7 445 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 PRMT7Q9NVM4 692 aaPredicted RBP23.4■■□□□ 1.34
CCM2-206ENST00000474617 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.4■■□□□ 1.34
CCM2-206ENST00000474617 ANKFY1Q9P2R3 1169 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 L1RE1Q9UN81 338 aa23.4■■□□□ 1.34
CCM2-206ENST00000474617 SLC15A5A6NIM6 579 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 CCDC188H7C350 402 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 HLA-DRAP01903 254 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 FTLP02792 175 aaPredicted RBP23.39■■□□□ 1.34
CCM2-206ENST00000474617 HOXC6P09630 235 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 MYBL1P10243 752 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 TMOD1P28289 359 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 PHKA2P46019 1235 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 RPS6KC1Q96S38 1066 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 R3HDMLQ9H3Y0 253 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 TOPORSQ9NS56 1045 aaPredicted RBP23.39■■□□□ 1.34
CCM2-206ENST00000474617 GTF3C4Q9UKN8 822 aa23.39■■□□□ 1.34
CCM2-206ENST00000474617 CNTNAP2Q9UHC6 1331 aa23.39■■□□□ 1.33
CCM2-206ENST00000474617 A0A0U1RQG5 324 aaPredicted RBP23.38■■□□□ 1.33
CCM2-206ENST00000474617 PGRMC1O00264 195 aaKnown RBP23.38■■□□□ 1.33
CCM2-206ENST00000474617 KCNK3O14649 394 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 CYP26A1O43174 497 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 SGPL1O95470 568 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 HOXD8P13378 290 aaPredicted RBP23.38■■□□□ 1.33
CCM2-206ENST00000474617 PROZP22891 400 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 MARK3P27448 753 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 ACOT2P49753 483 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 PTENP60484 403 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 BIRC3Q13489 604 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 TDRD10Q5VZ19 366 aaKnown RBP23.38■■□□□ 1.33
CCM2-206ENST00000474617 C8orf74Q6P047 294 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 MPZL3Q6UWV2 235 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 PLEKHH3Q7Z736 793 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 NOP9Q86U38 636 aaKnown RBP23.38■■□□□ 1.33
CCM2-206ENST00000474617 RASGEF1CQ8N431 466 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 EIF1ADQ8N9N8 165 aaKnown RBP23.38■■□□□ 1.33
CCM2-206ENST00000474617 USP38Q8NB14 1042 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 ZNF516Q92618 1163 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 CARD9Q9H257 536 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 ABHD16BQ9H3Z7 469 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 CNTN6Q9UQ52 1028 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 LGALS2P05162 132 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 POTEJP0CG39 1038 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 CXCR5P32302 372 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 CDC42EP1Q00587 391 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 C2orf54Q08AI8 447 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 MKRN4PQ13434 485 aaPredicted RBP23.38■■□□□ 1.33
CCM2-206ENST00000474617 IQSEC1Q6DN90 963 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 GPR142Q7Z601 462 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 DPP9Q86TI2 863 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 SLC20A1Q8WUM9 679 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.38■■□□□ 1.33
CCM2-206ENST00000474617 TCHPQ9BT92 498 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 THAP2Q9H0W7 228 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 PDE11AQ9HCR9 933 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 STIM2Q9P246 746 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 TNFSF13BQ9Y275 285 aa23.38■■□□□ 1.33
CCM2-206ENST00000474617 IL18RAPO95256 599 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 C22orf31O95567 290 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 CHRNB2P17787 502 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 FMO1Q01740 532 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 TNFAIP2Q03169 654 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 CUL2Q13617 745 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 EFCAB12Q6NXP0 572 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 TRIM50Q86XT4 487 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 KAT5Q92993 513 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 HAPLN2Q9GZV7 340 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 KATNBL1Q9H079 304 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 TMEM59LQ9UK28 342 aa23.37■■□□□ 1.33
CCM2-206ENST00000474617 MCM3APO60318 1980 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 TMCO5BA8MYB1 307 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 FAM189A1O60320 539 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 BUB1BO60566 1050 aaPredicted RBP23.36■■□□□ 1.33
CCM2-206ENST00000474617 PHACTR2O75167 634 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 CYP1A2P05177 515 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 SRGAP2CP0DJJ0 459 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 HSPA6P17066 643 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 ABCB4P21439 1286 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 DUOXA2Q1HG44 320 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 DUSP28Q4G0W2 176 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 ACAD10Q6JQN1 1059 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 CCNI2Q6ZMN8 369 aaPredicted RBP23.36■■□□□ 1.33
CCM2-206ENST00000474617 SLC47A2Q86VL8 602 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 RHPN2Q8IUC4 686 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 UBL4BQ8N7F7 174 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 DDX1Q92499 740 aaKnown RBP23.36■■□□□ 1.33
CCM2-206ENST00000474617 AVENQ9NQS1 362 aaPredicted RBP23.36■■□□□ 1.33
CCM2-206ENST00000474617 PDGFCQ9NRA1 345 aa23.36■■□□□ 1.33
CCM2-206ENST00000474617 CTTNBP2NLQ9P2B4 639 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms