RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 AAASQ9NRG9 546 aa20.67■□□□□ 0.9
CTDSP1-207ENST00000473420 MIOSQ9NXC5 875 aa20.67■□□□□ 0.9
CTDSP1-207ENST00000473420 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.67■□□□□ 0.9
CTDSP1-207ENST00000473420 CLIC2O15247 247 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 MEFVO15553 781 aaPredicted RBP20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 POMCP01189 267 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 THP07101 528 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 KCNE1P15382 129 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 ACOT2P49753 483 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 PPP2R3AQ06190 1150 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 DSC1Q08554 894 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 ZCWPW2Q504Y3 356 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 ISM2Q6H9L7 571 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 CENPPQ6IPU0 288 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 XXYLT1Q8NBI6 393 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 SYAP1Q96A49 352 aaPredicted RBP20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 SAAL1Q96ER3 474 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 DHTKD1Q96HY7 919 aaPredicted RBP20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 FBXL18Q96ME1 805 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 FAM213AQ9BRX8 229 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 TMEM175Q9BSA9 504 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 ASB7Q9H672 318 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 DMAC2Q9NW81 257 aa20.66■□□□□ 0.9
CTDSP1-207ENST00000473420 COL4A4P53420 1690 aaPredicted RBP20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 SMIM28A0A1B0GU29 152 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 C5orf67F2Z3F1 127 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 PSMA7O14818 248 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 IL18RAPO95256 599 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 RB1P06400 928 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 FXR1P51114 621 aaKnown RBP eCLIP20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 EDRF1Q3B7T1 1238 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 SPOUT1Q5T280 376 aaKnown RBP20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 ZNF697Q5TEC3 545 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 BRSK2Q8IWQ3 736 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 COLGALT1Q8NBJ5 622 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 FAM193BQ96PV7 902 aaPredicted RBP20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 PPP1R10Q96QC0 940 aaKnown RBP20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 PLVAPQ9BX97 442 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 SEMA6BQ9H3T3 888 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 ZNF576Q9H609 170 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 NRDE2Q9H7Z3 1164 aa20.65■□□□□ 0.9
CTDSP1-207ENST00000473420 PPP1R3GB7ZBB8 358 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 DDHD2O94830 711 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 NR3C1P04150 777 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 CCNE1P24864 410 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 BMPR1AP36894 532 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 CYP2J2P51589 502 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 LRRC63Q05C16 580 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 TUSC3Q13454 348 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 NAB2Q15742 525 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 SKOR2Q2VWA4 1001 aaPredicted RBP20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 FOXR2Q6PJQ5 311 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 ZNF280BQ86YH2 543 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 COLGALT2Q8IYK4 626 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 ZSWIM2Q8NEG5 633 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 P2RX5Q93086 422 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 ZNF558Q96NG5 402 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 TSG101Q99816 390 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 C17orf80Q9BSJ5 609 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 CXCL16Q9H2A7 254 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 SLC38A7Q9NVC3 462 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 RBAKQ9NYW8 714 aaPredicted RBP20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 TMEM63CQ9P1W3 806 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 HCSTQ9UBK5 93 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 PLAGL2Q9UPG8 496 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 DERAQ9Y315 318 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 PCDHB12Q9Y5F1 795 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 CHD9Q3L8U1 2897 aa20.64■□□□□ 0.89
CTDSP1-207ENST00000473420 PLXNA4Q9HCM2 1894 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 GOLGA8IPA6NC78 632 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 ZNF233A6NK53 670 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 GOLGA8JA6NMD2 632 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 LACTBL1A8MY62 500 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 ZC3H11AO75152 810 aaKnown RBP eCLIP20.63■□□□□ 0.892e-6■■■■■ 37.4
CTDSP1-207ENST00000473420 CD44P16070 742 aaKnown RBP20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 RPL13P26373 211 aaKnown RBP20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 CTNNB1P35222 781 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 EPC2Q52LR7 807 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 KCNT2Q6UVM3 1135 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 NT5DC4Q86YG4 428 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 MLKLQ8NB16 471 aa20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 TTYH1Q9H313 450 aaPredicted RBP20.63■□□□□ 0.89
CTDSP1-207ENST00000473420 XPOTO43592 962 aaKnown RBP20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 B4GALT3O60512 393 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 EXOC3O60645 756 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 PPM1AP35813 382 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 ALDH7A1P49419 539 aaKnown RBP20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 BCAR1P56945 870 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 NLRP12P59046 1061 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 SURF1Q15526 300 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 SNRNP35Q16560 246 aaKnown RBP20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 GLRA4Q5JXX5 417 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 SPRED2Q7Z698 418 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 FBXO22Q8NEZ5 403 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 UROC1Q96N76 676 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 ZMAT2Q96NC0 199 aaKnown RBP20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 C11orf84Q9BUA3 381 aaPredicted RBP20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 DNAJB4Q9UDY4 337 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 C2CD2Q9Y426 696 aa20.62■□□□□ 0.89
CTDSP1-207ENST00000473420 BICDL2A1A5D9 508 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms