RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RPL17P18621 184 aaKnown RBP16.81■□□□□ 0.28
VTI1A-203ENST00000472892 AVPR2P30518 371 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 DMP1Q13316 513 aaPredicted RBP16.81■□□□□ 0.28
VTI1A-203ENST00000472892 FAM171A1Q5VUB5 890 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 PRSS55Q6UWB4 352 aaPredicted RBP16.81■□□□□ 0.28
VTI1A-203ENST00000472892 PRSS33Q8NF86 280 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 LNX1Q8TBB1 728 aaPredicted RBP16.81■□□□□ 0.28
VTI1A-203ENST00000472892 HASPINQ8TF76 798 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 PPP1R10Q96QC0 940 aaKnown RBP16.81■□□□□ 0.28
VTI1A-203ENST00000472892 ACO2Q99798 780 aaKnown RBP16.81■□□□□ 0.28
VTI1A-203ENST00000472892 TTPALQ9BTX7 342 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 TIPINQ9BVW5 301 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 NT5C3AQ9H0P0 336 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 SMOC2Q9H3U7 446 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 KMT5AQ9NQR1 393 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 PHLPP2Q6ZVD8 1323 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 H3BQV1 296 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 PDGFBP01127 241 aaPredicted RBP16.8■□□□□ 0.28
VTI1A-203ENST00000472892 MYBP10242 640 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 GUCY2CP25092 1073 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 VCPP55072 806 aaKnown RBP16.8■□□□□ 0.28
VTI1A-203ENST00000472892 ELAVL2Q12926 359 aaKnown RBP16.8■□□□□ 0.28
VTI1A-203ENST00000472892 XKR4Q5GH76 650 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 ARL6IP4Q66PJ3 421 aaKnown RBP16.8■□□□□ 0.28
VTI1A-203ENST00000472892 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 ALKAL1Q6UXT8 129 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 TAS1R3Q7RTX0 852 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 SYT2Q8N9I0 419 aaPredicted RBP16.8■□□□□ 0.28
VTI1A-203ENST00000472892 PIK3R5Q8WYR1 880 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 PNMA5Q96PV4 448 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 CLSTN3Q9BQT9 956 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 MRPL4Q9BYD3 311 aaKnown RBP16.8■□□□□ 0.28
VTI1A-203ENST00000472892 ZDHHC7Q9NXF8 308 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 KCNG1Q9UIX4 513 aa16.8■□□□□ 0.28
VTI1A-203ENST00000472892 SMIM28A0A1B0GU29 152 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 SFI1A8K8P3 1242 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 TMEM189-UBE2V1I3L0A0 370 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 N4BP1O75113 896 aaKnown RBP16.79■□□□□ 0.28
VTI1A-203ENST00000472892 PROZP22891 400 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 IGFBP6P24592 240 aaPredicted RBP16.79■□□□□ 0.28
VTI1A-203ENST00000472892 GRM5P41594 1212 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 CD300LGQ6UXG3 332 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 ALYREFQ86V81 257 aaKnown RBP16.79■□□□□ 0.28
VTI1A-203ENST00000472892 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 GLYCTKQ8IVS8 523 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 SPIRE2Q8WWL2 714 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 SMG7Q92540 1137 aaKnown RBP16.79■□□□□ 0.28
VTI1A-203ENST00000472892 STAMQ92783 540 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 TBC1D32Q96NH3 1257 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 PRKD2Q9BZL6 878 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 CDT1Q9H211 546 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 KCNK12Q9HB15 430 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 SMC3Q9UQE7 1217 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 PLXNA3P51805 1871 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 DENND4AQ7Z401 1863 aa16.79■□□□□ 0.28
VTI1A-203ENST00000472892 VWA3AA6NCI4 1184 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 ABLIM1O14639 778 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 SLC16A4O15374 487 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 ZMYND10O75800 440 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 FGFR3P22607 806 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 CLCNKBP51801 687 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 NUBP1P53384 320 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 PTPN5P54829 565 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 TCF15Q12870 199 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 TDGQ13569 410 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 ZRSR1Q15695 479 aaKnown RBP16.78■□□□□ 0.28
VTI1A-203ENST00000472892 PSMD5Q16401 504 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 UPP1Q16831 310 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 GLRA4Q5JXX5 417 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 LARP1BQ659C4 914 aaKnown RBP16.78■□□□□ 0.28
VTI1A-203ENST00000472892 PDXDC1Q6P996 788 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.78■□□□□ 0.28
VTI1A-203ENST00000472892 CEP120Q8N960 986 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 UROC1Q96N76 676 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
VTI1A-203ENST00000472892 TARS2Q9BW92 718 aaKnown RBP16.78■□□□□ 0.28
VTI1A-203ENST00000472892 TOPORSQ9NS56 1045 aaPredicted RBP16.78■□□□□ 0.28
VTI1A-203ENST00000472892 KCND2Q9NZV8 630 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 IGSF9Q9P2J2 1179 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 EPS15L1Q9UBC2 864 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
VTI1A-203ENST00000472892 ZDBF2Q9HCK1 2354 aa16.78■□□□□ 0.28
VTI1A-203ENST00000472892 CLUHO75153 1309 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 B3GAT3O94766 335 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 MCF2P10911 925 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 PLS3P13797 630 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 YARSP54577 528 aaKnown RBP16.77■□□□□ 0.28
VTI1A-203ENST00000472892 ZNF568Q3ZCX4 644 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 TMEM119Q4V9L6 283 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 AK8Q96MA6 479 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 PLIN2Q99541 437 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 PIDD1Q9HB75 910 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 FBXW11Q9UKB1 542 aa16.77■□□□□ 0.28
VTI1A-203ENST00000472892 C2orf16Q68DN1 1984 aa16.77■□□□□ 0.27
VTI1A-203ENST00000472892 PIEZO1Q92508 2521 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 ADAM12O43184 909 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 SLC26A4O43511 780 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 PLA2G4BP0C869 781 aa16.76■□□□□ 0.27
VTI1A-203ENST00000472892 GBP2P32456 591 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms