RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TISP43B9A030 160 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 NBNO60934 754 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 LIG4P49917 911 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 CLCN3P51790 818 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 GNG11P61952 73 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 MYL7Q01449 175 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 SNRNP35Q16560 246 aaKnown RBP18.94■□□□□ 0.62
HSPG2-208ENST00000471322 TMEM240Q5SV17 173 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 TMC2Q8TDI7 906 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 PSPC1Q8WXF1 523 aaKnown RBP18.94■□□□□ 0.62
HSPG2-208ENST00000471322 SPAG5Q96R06 1193 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 HAUS4Q9H6D7 363 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 SUGCTQ9HAC7 445 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 GINS2Q9Y248 185 aa18.94■□□□□ 0.62
HSPG2-208ENST00000471322 CHRNA1P02708 482 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 RFX1P22670 979 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 TAS1R3Q7RTX0 852 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 PRPF31Q8WWY3 499 aaKnown RBP18.93■□□□□ 0.62
HSPG2-208ENST00000471322 ZNF668Q96K58 619 aaPredicted RBP18.93■□□□□ 0.62
HSPG2-208ENST00000471322 C2orf40Q9H1Z8 148 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 LZTFL1Q9NQ48 299 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 ARHGAP20Q9P2F6 1191 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 DNAI1Q9UI46 699 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 STYXL1Q9Y6J8 313 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 COL1A2P08123 1366 aa18.93■□□□□ 0.62
HSPG2-208ENST00000471322 ASAP2O43150 1006 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 AKR1B10O60218 316 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 LCA5LO95447 670 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 VTNP04004 478 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 TRIM49P0CI25 452 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 TRIM49CP0CI26 452 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 ACTN1P12814 892 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 GTF2H1P32780 548 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 EIF4A3P38919 411 aaKnown RBP18.92■□□□□ 0.62
HSPG2-208ENST00000471322 ASIC2Q16515 512 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 EFCAB12Q6NXP0 572 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 RSPH3Q86UC2 560 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 KIAA0319LQ8IZA0 1049 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 GPD1LQ8N335 351 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 RNPC3Q96LT9 517 aaKnown RBP18.92■□□□□ 0.62
HSPG2-208ENST00000471322 MFSD14AQ96MC6 490 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 ARID2Q68CP9 1835 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 EVPLQ92817 2033 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 MAGEB2O15479 319 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 EXTL3O43909 919 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 FGBP02675 491 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 ANXA13P27216 316 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 CASQ1P31415 396 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 DRP2Q13474 957 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 RAPGEF1Q13905 1077 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 CAPSQ13938 189 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 TFDP1Q14186 410 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 TCTN1Q2MV58 587 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 HABP4Q5JVS0 413 aaKnown RBP18.92■□□□□ 0.62
HSPG2-208ENST00000471322 SLC39A4Q6P5W5 647 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 KIAA1328Q86T90 577 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 ZBTB8OSQ8IWT0 167 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 RPUSD2Q8IZ73 545 aaKnown RBP18.92■□□□□ 0.62
HSPG2-208ENST00000471322 EHBP1Q8NDI1 1231 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 TSGA10Q9BZW7 698 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 INTS2Q9H0H0 1204 aaKnown RBP18.92■□□□□ 0.62
HSPG2-208ENST00000471322 SIX2Q9NPC8 291 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 LUC7LQ9NQ29 371 aaKnown RBP18.92■□□□□ 0.62
HSPG2-208ENST00000471322 CXXC1Q9P0U4 656 aaPredicted RBP18.92■□□□□ 0.62
HSPG2-208ENST00000471322 REXO2Q9Y3B8 237 aaKnown RBP18.92■□□□□ 0.62
HSPG2-208ENST00000471322 CDY2AQ9Y6F7 541 aa18.92■□□□□ 0.62
HSPG2-208ENST00000471322 TANC1Q9C0D5 1861 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 SMIM35A0A1B0GVV1 85 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 ZNF233A6NK53 670 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 LDHAP00338 332 aaKnown RBP18.91■□□□□ 0.62
HSPG2-208ENST00000471322 GHRP10912 638 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 KIF11P52732 1056 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 MRPS6P82932 125 aaKnown RBP18.91■□□□□ 0.62
HSPG2-208ENST00000471322 LAMTOR4Q0VGL1 99 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 CBWD6Q4V339 395 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 CBWD3Q5JTY5 395 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 CBWD5Q5RIA9 395 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 HGSNATQ68CP4 663 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 ZPBP2Q6X784 338 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 CBWD2Q8IUF1 395 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 STK33Q9BYT3 514 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 SUCLA2Q9P2R7 463 aaPredicted RBP18.91■□□□□ 0.62
HSPG2-208ENST00000471322 AKT3Q9Y243 479 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 USP20Q9Y2K6 914 aa18.91■□□□□ 0.62
HSPG2-208ENST00000471322 EYSQ5T1H1 3165 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 GOLGA8IPA6NC78 632 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 GOLGA8JA6NMD2 632 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 ZBBXA8MT70 800 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 RIOK3O14730 519 aaKnown RBP18.9■□□□□ 0.62
HSPG2-208ENST00000471322 KRT86O43790 486 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 CCDC172P0C7W6 258 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 ARHGAP25P42331 645 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 KLHL30Q0D2K2 578 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 KIZQ2M2Z5 673 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 TDRD12Q587J7 1177 aaKnown RBP18.9■□□□□ 0.62
HSPG2-208ENST00000471322 CDCA2Q69YH5 1023 aaPredicted RBP18.9■□□□□ 0.62
HSPG2-208ENST00000471322 PSRC1Q6PGN9 363 aaPredicted RBP18.9■□□□□ 0.62
HSPG2-208ENST00000471322 PARD3BQ8TEW8 1205 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 CDHR5Q9HBB8 845 aa18.9■□□□□ 0.62
HSPG2-208ENST00000471322 FHOD1Q9Y613 1164 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms