RNA–Protein interactions for RNA: ENST00000470558.5

ARF1-203, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-203ENST00000470558 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
ARF1-203ENST00000470558 FMR1NBQ8N0W7 255 aaPredicted RBP17.08■□□□□ 0.32
ARF1-203ENST00000470558 GLIS3Q8NEA6 775 aa17.08■□□□□ 0.32
ARF1-203ENST00000470558 IPO9Q96P70 1041 aaKnown RBP17.08■□□□□ 0.32
ARF1-203ENST00000470558 MSTO1Q9BUK6 570 aa17.08■□□□□ 0.32
ARF1-203ENST00000470558 IKZF4Q9H2S9 585 aa17.08■□□□□ 0.32
ARF1-203ENST00000470558 NSUN3Q9H649 340 aaKnown RBP17.08■□□□□ 0.32
ARF1-203ENST00000470558 TMEM206Q9H813 350 aa17.08■□□□□ 0.32
ARF1-203ENST00000470558 XIRP2A4UGR9 3374 aa17.08■□□□□ 0.32
ARF1-203ENST00000470558 SMIM28A0A1B0GU29 152 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 TISP43B9A030 160 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 EIF3DO15371 548 aaKnown RBP eCLIP17.07■□□□□ 0.32
ARF1-203ENST00000470558 FAM189A1O60320 539 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 CSPG5O95196 566 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 IRS1P35568 1242 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 FAM160A1Q05DH4 1040 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
ARF1-203ENST00000470558 POSTNQ15063 836 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 SLC10A6Q3KNW5 377 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 PDE12Q6L8Q7 609 aaKnown RBP17.07■□□□□ 0.32
ARF1-203ENST00000470558 EPM2AIP1Q7L775 607 aaPredicted RBP17.07■□□□□ 0.32
ARF1-203ENST00000470558 DDX53Q86TM3 631 aaKnown RBP17.07■□□□□ 0.32
ARF1-203ENST00000470558 ENGASEQ8NFI3 743 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 ZNF507Q8TCN5 953 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 MICAL1Q8TDZ2 1067 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 BCL7CQ8WUZ0 217 aaPredicted RBP17.07■□□□□ 0.32
ARF1-203ENST00000470558 CCDC34Q96HJ3 373 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 SNX27Q96L92 541 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 PPP1R10Q96QC0 940 aaKnown RBP17.07■□□□□ 0.32
ARF1-203ENST00000470558 COLEC11Q9BWP8 271 aa17.07■□□□□ 0.32
ARF1-203ENST00000470558 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
ARF1-203ENST00000470558 ADSSP30520 456 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 TNFSF9P41273 254 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 PSMD2Q13200 908 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 KMT5BQ4FZB7 885 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 TCEAL5Q5H9L2 206 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 TMC7Q7Z402 723 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 POMGNT1Q8WZA1 660 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 ZMAT2Q96NC0 199 aaKnown RBP17.06■□□□□ 0.32
ARF1-203ENST00000470558 PLEKHA5Q9HAU0 1116 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 SLC39A2Q9NP94 309 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 NGRNQ9NPE2 291 aaKnown RBP17.06■□□□□ 0.32
ARF1-203ENST00000470558 EXOC1Q9NV70 894 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 CNTN3Q9P232 1028 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 STK39Q9UEW8 545 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 AGO2Q9UKV8 859 aaKnown RBP17.06■□□□□ 0.32
ARF1-203ENST00000470558 PRG3Q9Y2Y8 225 aaPredicted RBP17.06■□□□□ 0.32
ARF1-203ENST00000470558 SCN1AP35498 2009 aa17.06■□□□□ 0.32
ARF1-203ENST00000470558 FSCN2O14926 492 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
ARF1-203ENST00000470558 RPN1P04843 607 aaKnown RBP17.05■□□□□ 0.32
ARF1-203ENST00000470558 PRR29P0C7W0 189 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 CXCL8P10145 99 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 KCNE1P15382 129 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 GARTP22102 1010 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 HOXD13P35453 343 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 DPYDQ12882 1025 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 SKIV2LQ15477 1246 aaKnown RBP17.05■□□□□ 0.32
ARF1-203ENST00000470558 ZBTB41Q5SVQ8 909 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 VPS52Q8N1B4 723 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 PPP2R3CQ969Q6 453 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 TCF25Q9BQ70 676 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 PAAF1Q9BRP4 392 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 RPF1Q9H9Y2 349 aaKnown RBP17.05■□□□□ 0.32
ARF1-203ENST00000470558 ENTPD7Q9NQZ7 604 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 SLC38A7Q9NVC3 462 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 MARCH5Q9NX47 278 aa17.05■□□□□ 0.32
ARF1-203ENST00000470558 CPSF3Q9UKF6 684 aaKnown RBP17.05■□□□□ 0.32
ARF1-203ENST00000470558 TCF20Q9UGU0 1960 aaKnown RBP17.05■□□□□ 0.32
ARF1-203ENST00000470558 UBE4BO95155 1302 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 TTC26A0AVF1 554 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 CASTOR2A6NHX0 329 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 LDHAP00338 332 aaKnown RBP17.04■□□□□ 0.32
ARF1-203ENST00000470558 ADRB2P07550 413 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 ACOT2P49753 483 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 STK4Q13043 487 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 HSP90AA2PQ14568 343 aaPredicted RBP17.04■□□□□ 0.32
ARF1-203ENST00000470558 BMS1Q14692 1282 aaKnown RBP17.04■□□□□ 0.32
ARF1-203ENST00000470558 ENOX2Q16206 610 aaKnown RBP17.04■□□□□ 0.32
ARF1-203ENST00000470558 PLPP4Q5VZY2 271 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 SCFD1Q8WVM8 642 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 RABGGTAQ92696 567 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 CCDC47Q96A33 483 aaKnown RBP17.04■□□□□ 0.32
ARF1-203ENST00000470558 TIGD1Q96MW7 591 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 VN1R3Q9BXE9 311 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 ZBP1Q9H171 429 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 CACNG4Q9UBN1 327 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 PCDHGC5Q9Y5F6 944 aa17.04■□□□□ 0.32
ARF1-203ENST00000470558 LACTBL1A8MY62 500 aa17.03■□□□□ 0.32
ARF1-203ENST00000470558 F8W810 466 aa17.03■□□□□ 0.32
ARF1-203ENST00000470558 TADA2AO75478 443 aa17.03■□□□□ 0.32
ARF1-203ENST00000470558 POU5F1Q01860 360 aaKnown RBP17.03■□□□□ 0.32
ARF1-203ENST00000470558 PPP2R3AQ06190 1150 aa17.03■□□□□ 0.32
ARF1-203ENST00000470558 SMC1AQ14683 1233 aaKnown RBP17.03■□□□□ 0.32
ARF1-203ENST00000470558 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
ARF1-203ENST00000470558 CRELD2Q6UXH1 353 aaPredicted RBP17.03■□□□□ 0.32
ARF1-203ENST00000470558 ADGRD2Q7Z7M1 963 aa17.03■□□□□ 0.32
ARF1-203ENST00000470558 CD302Q8IX05 232 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms