RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 RBM19Q9Y4C8 960 aaKnown RBP34.43■■■■□ 3.1
HMG20B-209ENST00000470356 PHLPP2Q6ZVD8 1323 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 MYH11P35749 1972 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 DOCK8Q8NF50 2099 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 AVPR2P30518 371 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 ELAVL2Q12926 359 aaKnown RBP34.42■■■■□ 3.1
HMG20B-209ENST00000470356 MAPK7Q13164 816 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 HYIQ5T013 277 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 PRSS55Q6UWB4 352 aaPredicted RBP34.42■■■■□ 3.1
HMG20B-209ENST00000470356 GLYCTKQ8IVS8 523 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 PRSS33Q8NF86 280 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 PIK3R5Q8WYR1 880 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 SMG7Q92540 1137 aaKnown RBP34.42■■■■□ 3.1
HMG20B-209ENST00000470356 ZNF707Q96C28 371 aaPredicted RBP34.42■■■■□ 3.1
HMG20B-209ENST00000470356 TIPINQ9BVW5 301 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 KMT5AQ9NQR1 393 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 ZDHHC7Q9NXF8 308 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 VWA8A3KMH1 1905 aa34.42■■■■□ 3.1
HMG20B-209ENST00000470356 PDGFBP01127 241 aaPredicted RBP34.41■■■■□ 3.1
HMG20B-209ENST00000470356 VCPP55072 806 aaKnown RBP34.41■■■■□ 3.1
HMG20B-209ENST00000470356 PPP1R10Q96QC0 940 aaKnown RBP34.41■■■■□ 3.1
HMG20B-209ENST00000470356 MRPL4Q9BYD3 311 aaKnown RBP34.41■■■■□ 3.1
HMG20B-209ENST00000470356 NT5C3AQ9H0P0 336 aa34.41■■■■□ 3.1
HMG20B-209ENST00000470356 PTPRHQ9HD43 1115 aa34.41■■■■□ 3.1
HMG20B-209ENST00000470356 GUCY2CP25092 1073 aa34.4■■■■□ 3.1
HMG20B-209ENST00000470356 ARL6IP4Q66PJ3 421 aaKnown RBP34.4■■■■□ 3.1
HMG20B-209ENST00000470356 TAS1R3Q7RTX0 852 aa34.4■■■■□ 3.1
HMG20B-209ENST00000470356 ALYREFQ86V81 257 aaKnown RBP34.4■■■■□ 3.1
HMG20B-209ENST00000470356 LNX1Q8TBB1 728 aaPredicted RBP34.4■■■■□ 3.1
HMG20B-209ENST00000470356 STAMQ92783 540 aa34.4■■■■□ 3.1
HMG20B-209ENST00000470356 NTPCRQ9BSD7 190 aaKnown RBP34.4■■■■□ 3.1
HMG20B-209ENST00000470356 DOCK6Q96HP0 2047 aa34.4■■■■□ 3.1
HMG20B-209ENST00000470356 GRM5P41594 1212 aa34.39■■■■□ 3.1
HMG20B-209ENST00000470356 ZRSR1Q15695 479 aaKnown RBP34.39■■■■□ 3.1
HMG20B-209ENST00000470356 CEP57Q86XR8 500 aa34.39■■■■□ 3.1
HMG20B-209ENST00000470356 PNMA5Q96PV4 448 aa34.39■■■■□ 3.1
HMG20B-209ENST00000470356 CLSTN3Q9BQT9 956 aa34.39■■■■□ 3.1
HMG20B-209ENST00000470356 CDT1Q9H211 546 aa34.39■■■■□ 3.1
HMG20B-209ENST00000470356 KCNG1Q9UIX4 513 aa34.39■■■■□ 3.1
HMG20B-209ENST00000470356 CITO14578 2027 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 CLUHO75153 1309 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 TMEM189-UBE2V1I3L0A0 370 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 N4BP1O75113 896 aaKnown RBP34.38■■■■□ 3.09
HMG20B-209ENST00000470356 PTPN5P54829 565 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 PSMD5Q16401 504 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 GLRA4Q5JXX5 417 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 PDXDC1Q6P996 788 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 DCLRE1AQ6PJP8 1040 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 CCDC94Q9BW85 323 aaPredicted RBP34.38■■■■□ 3.09
HMG20B-209ENST00000470356 PRKD2Q9BZL6 878 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 KCNK12Q9HB15 430 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 SMC3Q9UQE7 1217 aa34.38■■■■□ 3.09
HMG20B-209ENST00000470356 VWA3AA6NCI4 1184 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 ZMYND10O75800 440 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 TDGQ13569 410 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 ZNF568Q3ZCX4 644 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 XKR4Q5GH76 650 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 ALKAL1Q6UXT8 129 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 CEP120Q8N960 986 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 SYT2Q8N9I0 419 aaPredicted RBP34.37■■■■□ 3.09
HMG20B-209ENST00000470356 UROC1Q96N76 676 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 TARS2Q9BW92 718 aaKnown RBP34.37■■■■□ 3.09
HMG20B-209ENST00000470356 PIDD1Q9HB75 910 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 TOPORSQ9NS56 1045 aaPredicted RBP34.37■■■■□ 3.09
HMG20B-209ENST00000470356 IGSF9Q9P2J2 1179 aa34.37■■■■□ 3.09
HMG20B-209ENST00000470356 SMIM28A0A1B0GU29 152 aa34.36■■■■□ 3.09
HMG20B-209ENST00000470356 SFI1A8K8P3 1242 aa34.36■■■■□ 3.09
HMG20B-209ENST00000470356 B3GAT3O94766 335 aa34.36■■■■□ 3.09
HMG20B-209ENST00000470356 YARSP54577 528 aaKnown RBP34.36■■■■□ 3.09
HMG20B-209ENST00000470356 PDZRN4Q6ZMN7 1036 aaPredicted RBP34.36■■■■□ 3.09
HMG20B-209ENST00000470356 SPIRE2Q8WWL2 714 aa34.36■■■■□ 3.09
HMG20B-209ENST00000470356 TBC1D32Q96NH3 1257 aa34.36■■■■□ 3.09
HMG20B-209ENST00000470356 ZSCAN21Q9Y5A6 473 aaPredicted RBP34.36■■■■□ 3.09
HMG20B-209ENST00000470356 SLC16A4O15374 487 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 MCF2P10911 925 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 PROZP22891 400 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 GBP2P32456 591 aaPredicted RBP34.35■■■■□ 3.09
HMG20B-209ENST00000470356 MRE11P49959 708 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 NUBP1P53384 320 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 TCF15Q12870 199 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 UPP1Q16831 310 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 KCND2Q9NZV8 630 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 EPS15L1Q9UBC2 864 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 FBXW11Q9UKB1 542 aa34.35■■■■□ 3.09
HMG20B-209ENST00000470356 FGFR3P22607 806 aa34.34■■■■□ 3.09
HMG20B-209ENST00000470356 CLCNKBP51801 687 aa34.34■■■■□ 3.09
HMG20B-209ENST00000470356 LARP1BQ659C4 914 aaKnown RBP34.34■■■■□ 3.09
HMG20B-209ENST00000470356 CDK5RAP3Q96JB5 506 aa34.34■■■■□ 3.09
HMG20B-209ENST00000470356 PLIN2Q99541 437 aa34.34■■■■□ 3.09
HMG20B-209ENST00000470356 TCHPQ9BT92 498 aa34.34■■■■□ 3.09
HMG20B-209ENST00000470356 ABLIM1O14639 778 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 PLS3P13797 630 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 IGFBP6P24592 240 aaPredicted RBP34.33■■■■□ 3.09
HMG20B-209ENST00000470356 SMTNP53814 917 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 SLC12A3P55017 1021 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 OSTNP61366 133 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 RAD51AP2Q09MP3 1159 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 MPZL3Q6UWV2 235 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 CD300LGQ6UXG3 332 aa34.33■■■■□ 3.09
HMG20B-209ENST00000470356 AK8Q96MA6 479 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms