RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 H2AFY2Q9P0M6 372 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 EXOC6BQ9Y2D4 811 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 NOP58Q9Y2X3 529 aaKnown RBP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 FPGT-TNNI3KV9GXZ4 949 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 GOLGB1Q14789 3259 aaKnown RBP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 ZNF609O15014 1411 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 NEMP1O14524 444 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 ERC2O15083 957 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 ZEB2O60315 1214 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 HIP1RO75146 1068 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 FKBP9O95302 570 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 BAG3O95817 575 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 ATF2P15336 505 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 FGFR2P21802 821 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 STAT5AP42229 794 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 LSSP48449 732 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 ZNF280AP59817 542 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-208ENST00000469585 TIMM10P62072 90 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 CACNB2Q08289 660 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-208ENST00000469585 MESP2Q0VG99 397 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 MAP3K12Q12852 859 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 TMED8Q6PL24 325 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-208ENST00000469585 TEPPQ6URK8 271 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 FKBP9P1Q75LS8 142 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 ARMC9Q7Z3E5 817 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 AMOTL1Q8IY63 956 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 FAM26EQ8N5C1 309 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 VGLL2Q8N8G2 317 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 SPATA5Q8NB90 893 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 MZB1Q8WU39 189 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 GCC1Q96CN9 775 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 TTC1Q99614 292 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 SGPP1Q9BX95 441 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 IFT22Q9H7X7 185 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 JAG2Q9Y219 1238 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 PPP2R3BQ9Y5P8 575 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 PDS5AQ29RF7 1337 aaKnown RBP7.45□□□□□ -1.22
PTCD3-208ENST00000469585 FAM205AQ6ZU69 1335 aa7.45□□□□□ -1.22
PTCD3-208ENST00000469585 LTBP1Q14766 1721 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-208ENST00000469585 SNAP23O00161 211 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 CELF2O95319 508 aaKnown RBP7.44□□□□□ -1.22
PTCD3-208ENST00000469585 C8BP07358 591 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 IBSPP21815 317 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-208ENST00000469585 IGFBP6P24592 240 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-208ENST00000469585 KLRK1P26718 216 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 SDHAP31040 664 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 MC3RP41968 323 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 ID4P47928 161 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 KIF11P52732 1056 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 NCKAP1LP55160 1127 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 IL2P60568 153 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 SART3Q15020 963 aaKnown RBP7.44□□□□□ -1.22
PTCD3-208ENST00000469585 TARBP2Q15633 366 aaKnown RBP7.44□□□□□ -1.22
PTCD3-208ENST00000469585 ZSCAN25Q6NSZ9 544 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 CC2D1AQ6P1N0 951 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-208ENST00000469585 IGDCC3Q8IVU1 814 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 EFHBQ8N7U6 833 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 KIAA1958Q8N8K9 716 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 EMC7Q9NPA0 242 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 SPTLC3Q9NUV7 552 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 SPO11Q9Y5K1 396 aa7.44□□□□□ -1.22
PTCD3-208ENST00000469585 MYH13Q9UKX3 1938 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 N4BP3O15049 544 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 TGM5O43548 720 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 BRINP1O60477 761 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 WDHD1O75717 1129 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 MAP4K4O95819 1239 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 CPEP16870 476 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 SLC9A1P19634 815 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 PHKA1P46020 1223 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 CDKN1CP49918 316 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 KPNA1P52294 538 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 EPHB3P54753 998 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 HERVK_113P62684 666 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 FKBP1BP68106 108 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 STAT4Q14765 748 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 C20orf194Q5TEA3 1177 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 NAA16Q6N069 864 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 LHFPL2Q6ZUX7 228 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 PROSER1Q86XN7 944 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 RPUSD2Q8IZ73 545 aaKnown RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 ELF4Q99607 663 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 YIPF4Q9BSR8 244 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 MRIQ9BWK5 157 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 IL1RAPL2Q9NP60 686 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 NGRNQ9NPE2 291 aaKnown RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 MCM8Q9UJA3 840 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 WASF3Q9UPY6 502 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 SALL1Q9NSC2 1324 aa7.43□□□□□ -1.22
PTCD3-208ENST00000469585 COL1A1P02452 1464 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-208ENST00000469585 hCG_2014768A0A024R1R8 64 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 RASSF10A6NK89 507 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 WNT10BO00744 389 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 IDH1O75874 414 aaKnown RBP7.42□□□□□ -1.22
PTCD3-208ENST00000469585 CDK11BP21127 795 aaKnown RBP7.42□□□□□ -1.22
PTCD3-208ENST00000469585 THBS2P35442 1172 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 DLG4P78352 724 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 OCRLQ01968 901 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 GRM1Q13255 1194 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms