RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 RNF39Q9H2S5 420 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 ASB7Q9H672 318 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 NRDE2Q9H7Z3 1164 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 RPF1Q9H9Y2 349 aaKnown RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 NGRNQ9NPE2 291 aaKnown RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 TLR9Q9NR96 1032 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 TBC1D7Q9P0N9 293 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 AGO2Q9UKV8 859 aaKnown RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 MTUS1Q9ULD2 1270 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 SSX2IPQ9Y2D8 614 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 FAN1Q9Y2M0 1017 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 GDAQ9Y2T3 454 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 DERAQ9Y315 318 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 SZT2Q5T011 3432 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 EPOPA6NHQ4 379 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 TMEM189-UBE2V1I3L0A0 370 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 KLRC4O43908 158 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 LPXNO60711 386 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 POMCP01189 267 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 ITGB1P05556 798 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 ADRB2P07550 413 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 HARSP12081 509 aaKnown RBP9.32□□□□□ -0.92
SSBP1-208ENST00000469123 CYP3A5P20815 502 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 IGFBP4P22692 258 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 RPL9P32969 192 aaKnown RBP9.32□□□□□ -0.92
SSBP1-208ENST00000469123 CASP5P51878 434 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 CREMQ03060 361 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 MYBPC2Q14324 1141 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 SURF1Q15526 300 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 KNOP1Q1ED39 458 aaKnown RBP9.32□□□□□ -0.92
SSBP1-208ENST00000469123 COBLL1Q53SF7 1204 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 DDX53Q86TM3 631 aaKnown RBP9.32□□□□□ -0.92
SSBP1-208ENST00000469123 C12orf56Q8IXR9 622 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 SPPL3Q8TCT6 385 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 MYLIPQ8WY64 445 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 IGSF21Q96ID5 467 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 ZFP42Q96MM3 310 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 PPP1R10Q96QC0 940 aaKnown RBP9.32□□□□□ -0.92
SSBP1-208ENST00000469123 NSUN3Q9H649 340 aaKnown RBP9.32□□□□□ -0.92
SSBP1-208ENST00000469123 CERS4Q9HA82 394 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 CPSF3Q9UKF6 684 aaKnown RBP9.32□□□□□ -0.92
SSBP1-208ENST00000469123 C2CD2Q9Y426 696 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 MTCH2Q9Y6C9 303 aa9.32□□□□□ -0.92
SSBP1-208ENST00000469123 SF3B1O75533 1304 aaKnown RBP eCLIP9.31□□□□□ -0.925e-6■■■□□ 17.1
SSBP1-208ENST00000469123 SMIM28A0A1B0GU29 152 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 TTC26A0AVF1 554 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 ARHGEF37A1IGU5 675 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 PTGESO14684 152 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 TRAPPC3O43617 180 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 EXTL3O43909 919 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 FAM189A1O60320 539 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 PRPF6O94906 941 aaKnown RBP9.31□□□□□ -0.92
SSBP1-208ENST00000469123 OR1G1P47890 313 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 SLC11A1P49279 550 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 STIM1Q13586 685 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 SLC39A4Q6P5W5 647 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 PDXDC1Q6P996 788 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 USP37Q86T82 979 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 ZNF280BQ86YH2 543 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 GRAMD1CQ8IYS0 662 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 GUF1Q8N442 669 aaKnown RBP9.31□□□□□ -0.92
SSBP1-208ENST00000469123 MAFAQ8NHW3 353 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-208ENST00000469123 SPATA20Q8TB22 786 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 SCFD1Q8WVM8 642 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 POF1BQ8WVV4 589 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 SMARCE1Q969G3 411 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 ZBTB45Q96K62 511 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-208ENST00000469123 SLC39A2Q9NP94 309 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 KLK14Q9P0G3 267 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 UBQLN1Q9UMX0 589 aaKnown RBP9.31□□□□□ -0.92
SSBP1-208ENST00000469123 USP20Q9Y2K6 914 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 IRAK3Q9Y616 596 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 PLXNA4Q9HCM2 1894 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 CHD9Q3L8U1 2897 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 CHD7Q9P2D1 2997 aa9.31□□□□□ -0.92
SSBP1-208ENST00000469123 ANK1P16157 1881 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.3□□□□□ -0.92
SSBP1-208ENST00000469123 ZNF233A6NK53 670 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 PDXKO00764 312 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 NRP1O14786 923 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 FSCN2O14926 492 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 GRM6O15303 877 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 CALUO43852 315 aaPredicted RBP9.3□□□□□ -0.92
SSBP1-208ENST00000469123 PRPF40AO75400 957 aaKnown RBP9.3□□□□□ -0.92
SSBP1-208ENST00000469123 DDHD2O94830 711 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 SLC34A2O95436 690 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 C1RP00736 705 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 SRGAP2BP0DMP2 458 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 CXCL8P10145 99 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 RPL13P26373 211 aaKnown RBP9.3□□□□□ -0.92
SSBP1-208ENST00000469123 ADSSP30520 456 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 LRPAP1P30533 357 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 OSTNP61366 133 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 STK4Q13043 487 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 ADGRE1Q14246 886 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 SMC1AQ14683 1233 aaKnown RBP9.3□□□□□ -0.92
SSBP1-208ENST00000469123 NFIL3Q16649 462 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 SLC10A6Q3KNW5 377 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 SLC9A9Q8IVB4 645 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 BRSK2Q8IWQ3 736 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms