RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 TMX1Q9H3N1 280 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 TMEM206Q9H813 350 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 MINDY3Q9H8M7 445 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 RC3H2Q9HBD1 1191 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 PTPRHQ9HD43 1115 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 GPRC5CQ9NQ84 441 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 KMT5AQ9NQR1 393 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 CGNQ9P2M7 1197 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 KANSL3Q9P2N6 904 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 STK39Q9UEW8 545 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 HOOK1Q9UJC3 728 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 EXOC7Q9UPT5 735 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 GINS2Q9Y248 185 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 TNFSF13BQ9Y275 285 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 NOC2LQ9Y3T9 749 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 RWDD3Q9Y3V2 267 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 INSL6Q9Y581 213 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 STYXL1Q9Y6J8 313 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 UBE4BO95155 1302 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ADGRA3Q8IWK6 1321 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 TRIOO75962 3097 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 CUL9Q8IWT3 2517 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MTCL1Q9Y4B5 1905 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 A0A1B0GVL5 298 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 CCDC169A6NNP5 214 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 C5orf67F2Z3F1 127 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 K7ENM7 598 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 ABLIM1O14639 778 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 HNRNPDLO14979 420 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MGEA5O60502 916 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 KINO60870 393 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 DGKIO75912 1065 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 RHOBTB3O94955 611 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PRKCBP05771 671 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 ACRP10323 421 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MCF2P10911 925 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PRKCSHP14314 528 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 ARF4P18085 180 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PTMSP20962 102 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PEX3P56589 373 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MCL1Q07820 350 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 TMEM62Q0P6H9 643 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 DPYDQ12882 1025 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MYBPC2Q14324 1141 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 POSTNQ15063 836 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 FOXD4L6Q3SYB3 417 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 LONRF3Q496Y0 759 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 HERC4Q5GLZ8 1057 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 HABP4Q5JVS0 413 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 FAM26FQ5R3K3 315 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 C9orf50Q5SZB4 431 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 L1TD1Q5T7N2 865 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 ATF7IP2Q5U623 682 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 TWF2Q6IBS0 349 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 SLFN12LQ6IEE8 588 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MPZL3Q6UWV2 235 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 FOXD4L3Q6VB84 417 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 EPM2AIP1Q7L775 607 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 TAS1R3Q7RTX0 852 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 RTN4RL1Q86UN2 441 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 BPHLQ86WA6 291 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 ECHDC2Q86YB7 292 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 KSR1Q8IVT5 923 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 C12orf56Q8IXR9 622 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 LRRC43Q8N309 656 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MYCT1Q8N699 235 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 GPR161Q8N6U8 529 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 TRIML1Q8N9V2 468 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 FSIP1Q8NA03 581 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 GOLGA5Q8TBA6 731 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 LINC01599Q8WXQ3 324 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 CLP1Q92989 425 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 CCDC47Q96A33 483 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 ZNF689Q96CS4 500 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 ITPKCQ96DU7 683 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PAGE5Q96GU1 130 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 SAMD11Q96NU1 681 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PLIN2Q99541 437 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PLVAPQ9BX97 442 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 TMEM117Q9H0C3 514 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 ZFAND3Q9H8U3 227 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MRPL44Q9H9J2 332 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PLEKHA5Q9HAU0 1116 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 GDPD2Q9HCC8 539 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 TOPORSQ9NS56 1045 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 FAM105AQ9NUU6 356 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PANK4Q9NVE7 773 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 RMND1Q9NWS8 449 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 CXXC1Q9P0U4 656 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 MSRAQ9UJ68 235 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 TBX20Q9UMR3 447 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PIN4Q9Y237 131 aaKnown RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 GIT1Q9Y2X7 761 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PCDHB7Q9Y5E2 793 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 COL4A4P53420 1690 aaPredicted RBP3.86□□□□□ -1.79
TRIM59-202ENST00000468542 PLXNA4Q9HCM2 1894 aa3.86□□□□□ -1.79
TRIM59-202ENST00000468542 TTC28Q96AY4 2481 aa3.85□□□□□ -1.79
TRIM59-202ENST00000468542 A0A087WWV3 80 aa3.85□□□□□ -1.79
TRIM59-202ENST00000468542 A0A0B4J269 797 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms