RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 DAZAP2Q15038 168 aaPredicted RBP2.21□□□□□ -2.06
SHQ1-204ENST00000468347 SF3B3Q15393 1217 aaKnown RBP2.21□□□□□ -2.06
SHQ1-204ENST00000468347 FAM178BQ8IXR5 827 aa2.21□□□□□ -2.06
SHQ1-204ENST00000468347 UNC5BQ8IZJ1 945 aa2.21□□□□□ -2.06
SHQ1-204ENST00000468347 DBF4BQ8NFT6 615 aa2.21□□□□□ -2.06
SHQ1-204ENST00000468347 PRSS3P2Q8NHM4 247 aa2.21□□□□□ -2.06
SHQ1-204ENST00000468347 MAML3Q96JK9 1138 aa2.21□□□□□ -2.06
SHQ1-204ENST00000468347 SOX7Q9BT81 388 aa2.21□□□□□ -2.06
SHQ1-204ENST00000468347 KCNE5Q9UJ90 142 aa2.21□□□□□ -2.06
SHQ1-204ENST00000468347 ST3GAL5Q9UNP4 418 aa2.21□□□□□ -2.06
SHQ1-204ENST00000468347 CCDC66A2RUB6 948 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 B2RBV5 119 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 TARM1B6A8C7 271 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 TISP43B9A030 160 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 GCOM1H8Y6P7 765 aaPredicted RBP2.2□□□□□ -2.06
SHQ1-204ENST00000468347 SLC28A2O43868 658 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 IRF9Q00978 393 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 APBA1Q02410 837 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 CNGA4Q8IV77 575 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 ZFP28Q8NHY6 868 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 ZNF428Q96B54 188 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 FAM84BQ96KN1 310 aaPredicted RBP2.2□□□□□ -2.06
SHQ1-204ENST00000468347 PHACTR3Q96KR7 559 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 SPATA32Q96LK8 384 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 TRAF6Q9Y4K3 522 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 TRIOBPQ9H2D6 2365 aa2.2□□□□□ -2.06
SHQ1-204ENST00000468347 A0A1W2PNU3 283 aaPredicted RBP2.19□□□□□ -2.06
SHQ1-204ENST00000468347 AGRPO00253 132 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 BCAR1P56945 870 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 ZNF394Q53GI3 561 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 MRM1Q6IN84 353 aaKnown RBP2.19□□□□□ -2.06
SHQ1-204ENST00000468347 VWA1Q6PCB0 445 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 DPH6Q7L8W6 267 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 MTDHQ86UE4 582 aaKnown RBP2.19□□□□□ -2.06
SHQ1-204ENST00000468347 NR2C2APQ86WQ0 139 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 COLGALT2Q8IYK4 626 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 OSBP2Q969R2 916 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 TRIM55Q9BYV6 548 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 MCM8Q9UJA3 840 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 PCDHGB7Q9Y5F8 929 aa2.19□□□□□ -2.06
SHQ1-204ENST00000468347 FNDC1Q4ZHG4 1894 aaPredicted RBP2.18□□□□□ -2.06
SHQ1-204ENST00000468347 A0A0A6YYJ9 748 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 CCDC78A2IDD5 438 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 E5RJQ4 531 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 ARVCFO00192 962 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 PRODHO43272 600 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 ERN1O75460 977 aaKnown RBP2.18□□□□□ -2.06
SHQ1-204ENST00000468347 SRGAP2CP0DJJ0 459 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 FGFR4P22455 802 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 NOVP48745 357 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 CXCR3P49682 368 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 DNM2P50570 870 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 KRTAP24-1Q3LI83 254 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 FAM47CQ5HY64 1035 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 GALNT16Q8N428 558 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 ZBTB38Q8NAP3 1195 aaPredicted RBP2.18□□□□□ -2.06
SHQ1-204ENST00000468347 PPP1R14CQ8TAE6 165 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 RPGRQ92834 1020 aaKnown RBP2.18□□□□□ -2.06
SHQ1-204ENST00000468347 WBP2Q969T9 261 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 FBXL20Q96IG2 436 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 PITHD1Q9GZP4 211 aaPredicted RBP2.18□□□□□ -2.06
SHQ1-204ENST00000468347 RNPEPQ9H4A4 650 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 GSTO2Q9H4Y5 243 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 PCDHA8Q9Y5H6 950 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 ZMYM3Q14202 1370 aa2.18□□□□□ -2.06
SHQ1-204ENST00000468347 ADM5C9JUS6 153 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 ABLIM3O94929 683 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 CAMTA2O94983 1202 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 CRYABP02511 175 aaKnown RBP2.17□□□□□ -2.06
SHQ1-204ENST00000468347 NHLRC4P0CG21 123 aaPredicted RBP2.17□□□□□ -2.06
SHQ1-204ENST00000468347 FGFR1P11362 822 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 ASIC2Q16515 512 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 TRIM71Q2Q1W2 868 aaKnown RBP2.17□□□□□ -2.06
SHQ1-204ENST00000468347 SLC10A6Q3KNW5 377 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 LVRNQ6Q4G3 990 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 SHC4Q6S5L8 630 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 LILRB2Q8N423 598 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 C16orf52Q8NHV5 167 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 SLITRK1Q96PX8 696 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 EPN3Q9H201 632 aa2.17□□□□□ -2.06
SHQ1-204ENST00000468347 LACTBL1A8MY62 500 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 MYO1FO00160 1098 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 SCAMP3O14828 347 aaKnown RBP2.16□□□□□ -2.06
SHQ1-204ENST00000468347 PROM1O43490 865 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 GPANK1O95872 356 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 HNRNPCP07910 306 aaKnown RBP eCLIP2.16□□□□□ -2.06
SHQ1-204ENST00000468347 PABPC1P11940 636 aaKnown RBP2.16□□□□□ -2.06
SHQ1-204ENST00000468347 HSD11B2P80365 405 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 HSP90AA2PQ14568 343 aaPredicted RBP2.16□□□□□ -2.06
SHQ1-204ENST00000468347 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 ATXN7L2Q5T6C5 722 aaPredicted RBP2.16□□□□□ -2.06
SHQ1-204ENST00000468347 PRAMEF9Q5VWM5 478 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 CISD2Q8N5K1 135 aaKnown RBP2.16□□□□□ -2.06
SHQ1-204ENST00000468347 CPLX3Q8WVH0 158 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 COQ8BQ96D53 544 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 CAMK1GQ96NX5 476 aa2.16□□□□□ -2.06
SHQ1-204ENST00000468347 TRGV11A0A075B6L2 103 aa2.15□□□□□ -2.07
SHQ1-204ENST00000468347 UBA6A0AVT1 1052 aaPredicted RBP2.15□□□□□ -2.07
SHQ1-204ENST00000468347 PRRT4C9JH25 899 aa2.15□□□□□ -2.07
SHQ1-204ENST00000468347 AQP7O14520 342 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms