RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 FAM189A1O60320 539 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 GCNT3O95395 438 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 MATR3P43243 847 aaKnown RBP eCLIP28.31■■■□□ 2.127e-8■■□□□ 11.8
SMC4-206ENST00000465903 NDUFA8P51970 172 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 YARSP54577 528 aaKnown RBP28.31■■■□□ 2.12
SMC4-206ENST00000465903 CUL4BQ13620 913 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 CTC1Q2NKJ3 1217 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 SLC10A6Q3KNW5 377 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 TPRNQ4KMQ1 711 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 L1TD1Q5T7N2 865 aaKnown RBP28.31■■■□□ 2.12
SMC4-206ENST00000465903 PABPC5Q96DU9 382 aaKnown RBP28.31■■■□□ 2.12
SMC4-206ENST00000465903 PAGE5Q96GU1 130 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 SNX27Q96L92 541 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 ZMAT2Q96NC0 199 aaKnown RBP28.31■■■□□ 2.12
SMC4-206ENST00000465903 IGFLR1Q9H665 355 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 NGRNQ9NPE2 291 aaKnown RBP28.31■■■□□ 2.12
SMC4-206ENST00000465903 ENTPD7Q9NQZ7 604 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 STYXL1Q9Y6J8 313 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 CTSAP10619 480 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 TNFSF9P41273 254 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 EHHADHQ08426 723 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 ZBTB41Q5SVQ8 909 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 RBM23Q86U06 439 aaKnown RBP28.3■■■□□ 2.12
SMC4-206ENST00000465903 RNF168Q8IYW5 571 aaPredicted RBP28.3■■■□□ 2.12
SMC4-206ENST00000465903 CEP57L1Q8IYX8 460 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 FSIP1Q8NA03 581 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 GLIS3Q8NEA6 775 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 ATXN2LQ8WWM7 1075 aaKnown RBP28.3■■■□□ 2.12
SMC4-206ENST00000465903 COLEC11Q9BWP8 271 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 GOLPH3LQ9H4A5 285 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 UBE2ZQ9H832 354 aaPredicted RBP28.3■■■□□ 2.12
SMC4-206ENST00000465903 TOPORSQ9NS56 1045 aaPredicted RBP28.3■■■□□ 2.12
SMC4-206ENST00000465903 PCDHB13Q9Y5F0 798 aa28.3■■■□□ 2.12
SMC4-206ENST00000465903 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.29■■■□□ 2.12
SMC4-206ENST00000465903 CASTOR2A6NHX0 329 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 PER2O15055 1255 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 LINC01565O15544 149 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 PRPF6O94906 941 aaKnown RBP28.29■■■□□ 2.12
SMC4-206ENST00000465903 LTBRP36941 435 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 SYKP43405 635 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 NRIP1P48552 1158 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 UNC13DQ70J99 1090 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 MRPL43Q8N983 215 aaKnown RBP28.29■■■□□ 2.12
SMC4-206ENST00000465903 ACCSQ96QU6 501 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 TLE6Q9H808 572 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 CNTN3Q9P232 1028 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 USP25Q9UHP3 1055 aa28.29■■■□□ 2.12
SMC4-206ENST00000465903 SPTBN5Q9NRC6 3674 aaKnown RBP28.29■■■□□ 2.12
SMC4-206ENST00000465903 C2orf71A6NGG8 1288 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 OGTO15294 1046 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 NCK2O43639 380 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 NR1I2O75469 434 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 CXCL14O95715 111 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 KCNE1P15382 129 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 ADAM15Q13444 863 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 ALCAMQ13740 583 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 SMC1AQ14683 1233 aaKnown RBP28.28■■■□□ 2.12
SMC4-206ENST00000465903 DUSP6Q16828 381 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 TAS1R1Q7RTX1 841 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 AUTS2Q8WXX7 1259 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 PPP2R3CQ969Q6 453 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 MSTO1Q9BUK6 570 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 CLDND1Q9NY35 253 aa28.28■■■□□ 2.12
SMC4-206ENST00000465903 PVALEFA0A1B0GWK0 134 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 KLRC4O43908 158 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 CLTAP09496 248 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 CXCL8P10145 99 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 ADSSP30520 456 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 ANP32AP39687 249 aaKnown RBP28.27■■■□□ 2.12
SMC4-206ENST00000465903 SOX4Q06945 474 aaPredicted RBP28.27■■■□□ 2.12
SMC4-206ENST00000465903 SLFN12LQ6IEE8 588 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 IRAK3Q9Y616 596 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 VWA8A3KMH1 1905 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 XIRP2A4UGR9 3374 aa28.27■■■□□ 2.12
SMC4-206ENST00000465903 TTC26A0AVF1 554 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 LILRB3O75022 631 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 SOD2P04179 222 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 IGFBP6P24592 240 aaPredicted RBP28.26■■■□□ 2.11
SMC4-206ENST00000465903 MRPS5P82675 430 aaKnown RBP28.26■■■□□ 2.11
SMC4-206ENST00000465903 DLX2Q07687 328 aaPredicted RBP28.26■■■□□ 2.11
SMC4-206ENST00000465903 HSP90AA2PQ14568 343 aaPredicted RBP28.26■■■□□ 2.11
SMC4-206ENST00000465903 EFHBQ8N7U6 833 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 ASB2Q96Q27 587 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 HERC2P3Q9BVR0 1158 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 GPR62Q9BZJ7 368 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 GOLGA2P5Q9HBQ8 144 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 CPSF3Q9UKF6 684 aaKnown RBP28.26■■■□□ 2.11
SMC4-206ENST00000465903 ADAM28Q9UKQ2 775 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 EXOC7Q9UPT5 735 aa28.26■■■□□ 2.11
SMC4-206ENST00000465903 ADRB2P07550 413 aa28.25■■■□□ 2.11
SMC4-206ENST00000465903 KCNC3Q14003 757 aa28.25■■■□□ 2.11
SMC4-206ENST00000465903 ENOX2Q16206 610 aaKnown RBP28.25■■■□□ 2.11
SMC4-206ENST00000465903 KYAT1Q16773 422 aa28.25■■■□□ 2.11
SMC4-206ENST00000465903 FAM26FQ5R3K3 315 aa28.25■■■□□ 2.11
SMC4-206ENST00000465903 CD300LGQ6UXG3 332 aa28.25■■■□□ 2.11
SMC4-206ENST00000465903 EPM2AIP1Q7L775 607 aaPredicted RBP28.25■■■□□ 2.11
SMC4-206ENST00000465903 PLEKHA5Q9HAU0 1116 aa28.25■■■□□ 2.11
SMC4-206ENST00000465903 STK39Q9UEW8 545 aa28.25■■■□□ 2.11
SMC4-206ENST00000465903 A0A0C4DFX4 3053 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 KIF4AO95239 1232 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms