RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PTPROQ16827 1216 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 SLC10A6Q3KNW5 377 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 ALKAL1Q6UXT8 129 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 TMEM173Q86WV6 379 aaPredicted RBP13.51□□□□□ -0.25
CHPF2-202ENST00000465601 NELFCDQ8IXH7 590 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 SCFD1Q8WVM8 642 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 POF1BQ8WVV4 589 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 POMGNT1Q8WZA1 660 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 MRPL38Q96DV4 380 aaKnown RBP13.51□□□□□ -0.25
CHPF2-202ENST00000465601 CCDC34Q96HJ3 373 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 TMEM175Q9BSA9 504 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 TMEM206Q9H813 350 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 TOPORSQ9NS56 1045 aaPredicted RBP13.51□□□□□ -0.25
CHPF2-202ENST00000465601 LMCD1Q9NZU5 365 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 CACNG4Q9UBN1 327 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 AGO2Q9UKV8 859 aaKnown RBP13.51□□□□□ -0.25
CHPF2-202ENST00000465601 PRG3Q9Y2Y8 225 aaPredicted RBP13.51□□□□□ -0.25
CHPF2-202ENST00000465601 ANK1P16157 1881 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 SMIM28A0A1B0GU29 152 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 EIF3DO15371 548 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHPF2-202ENST00000465601 FAM189A1O60320 539 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 ACOT2P49753 483 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 UBE2HP62256 183 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 PLCB3Q01970 1234 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 KRT17Q04695 432 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 PSMD2Q13200 908 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 TUSC3Q13454 348 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 XKR4Q5GH76 650 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 KIAA0895Q8NCT3 520 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 ZSWIM2Q8NEG5 633 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 MAFAQ8NHW3 353 aaPredicted RBP13.5□□□□□ -0.25
CHPF2-202ENST00000465601 BCL7CQ8WUZ0 217 aaPredicted RBP13.5□□□□□ -0.25
CHPF2-202ENST00000465601 ERCC4Q92889 916 aaPredicted RBP13.5□□□□□ -0.25
CHPF2-202ENST00000465601 CCDC47Q96A33 483 aaKnown RBP13.5□□□□□ -0.25
CHPF2-202ENST00000465601 TMEM169Q96HH4 297 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 IGSF21Q96ID5 467 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 SNX27Q96L92 541 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 ZMAT2Q96NC0 199 aaKnown RBP13.5□□□□□ -0.25
CHPF2-202ENST00000465601 LMAN2LQ9H0V9 348 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 PCIF1Q9H4Z3 704 aa13.5□□□□□ -0.25
CHPF2-202ENST00000465601 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
CHPF2-202ENST00000465601 PUF60Q9UHX1 559 aaKnown RBP13.5□□□□□ -0.25
CHPF2-202ENST00000465601 CASTOR2A6NHX0 329 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 LACTBL1A8MY62 500 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 F8W810 466 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 KINO60870 393 aaKnown RBP13.49□□□□□ -0.25
CHPF2-202ENST00000465601 IRS1P35568 1242 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 ERVFC1P60507 584 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 UBE3AQ05086 875 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 SPAG1Q07617 926 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 NAB2Q15742 525 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 ENOX2Q16206 610 aaKnown RBP13.49□□□□□ -0.25
CHPF2-202ENST00000465601 KYAT1Q16773 422 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 MICAL1Q8TDZ2 1067 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 FAM212AQ96EL1 285 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 SAAL1Q96ER3 474 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 PPP1R10Q96QC0 940 aaKnown RBP13.49□□□□□ -0.25
CHPF2-202ENST00000465601 PAAF1Q9BRP4 392 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 CBWD1Q9BRT8 395 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 COLEC11Q9BWP8 271 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 CPSF3Q9UKF6 684 aaKnown RBP13.49□□□□□ -0.25
CHPF2-202ENST00000465601 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
CHPF2-202ENST00000465601 UBE4BO95155 1302 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 CARNS1A5YM72 827 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 GOLGA8IPA6NC78 632 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 GOLGA8JA6NMD2 632 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
CHPF2-202ENST00000465601 CLIC2O15247 247 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 TGFB1I1O43294 461 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 RHOBTB3O94955 611 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 KCNE1P15382 129 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 GARTP22102 1010 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
CHPF2-202ENST00000465601 KCNB1Q14721 858 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 KNOP1Q1ED39 458 aaKnown RBP13.48□□□□□ -0.25
CHPF2-202ENST00000465601 BMT2Q1RMZ1 405 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 ARMCX5Q6P1M9 558 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 CRELD2Q6UXH1 353 aaPredicted RBP13.48□□□□□ -0.25
CHPF2-202ENST00000465601 NOC3LQ8WTT2 800 aaKnown RBP13.48□□□□□ -0.25
CHPF2-202ENST00000465601 C18orf25Q96B23 403 aaPredicted RBP13.48□□□□□ -0.25
CHPF2-202ENST00000465601 FAM213AQ9BRX8 229 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 PLEKHA5Q9HAU0 1116 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 GOLGA2P5Q9HBQ8 144 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 MARCH5Q9NX47 278 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 CNTN3Q9P232 1028 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
CHPF2-202ENST00000465601 SMC2O95347 1197 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 SLC34A2O95436 690 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 IGFBP6P24592 240 aaPredicted RBP13.47□□□□□ -0.25
CHPF2-202ENST00000465601 PPP2R3AQ06190 1150 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 HSP90AA2PQ14568 343 aaPredicted RBP13.47□□□□□ -0.25
CHPF2-202ENST00000465601 TCEAL5Q5H9L2 206 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 PLPP4Q5VZY2 271 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms