RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ADSSP30520 456 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 HOXD13P35453 343 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 OR1G1P47890 313 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 UBE3AQ05086 875 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 STK4Q13043 487 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 SLC10A6Q3KNW5 377 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 XKR4Q5GH76 650 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 SCFD1Q8WVM8 642 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 POF1BQ8WVV4 589 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 TMEM169Q96HH4 297 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 PLEKHA5Q9HAU0 1116 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 HOOK1Q9UJC3 728 aaKnown RBP15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 AGO2Q9UKV8 859 aaKnown RBP15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 LZTS1Q9Y250 596 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 UBE4BO95155 1302 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 EYSQ5T1H1 3165 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 PLXNA4Q9HCM2 1894 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 KINO60870 393 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 RHOBTB3O94955 611 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 CXCL8P10145 99 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 GARTP22102 1010 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 DNAJB1P25685 340 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 TNFSF9P41273 254 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 TUSC3Q13454 348 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 PNOCQ13519 176 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 CAMK1Q14012 370 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 GLRA4Q5JXX5 417 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 ZBTB41Q5SVQ8 909 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 ELOA2Q8IYF1 753 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 MICALL1Q8N3F8 863 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 MAFAQ8NHW3 353 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 IGSF21Q96ID5 467 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 SNX27Q96L92 541 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 PPP1R10Q96QC0 940 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 RPF1Q9H9Y2 349 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 CNTN3Q9P232 1028 aa15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 CPSF3Q9UKF6 684 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-205ENST00000464493 MEFVO15553 781 aaPredicted RBP15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 KCNE1P15382 129 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 ACOT2P49753 483 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 KCNB1Q14721 858 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 NAB2Q15742 525 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 CCDC85BQ15834 202 aaPredicted RBP15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 ENOX2Q16206 610 aaKnown RBP15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 BMT2Q1RMZ1 405 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 TMEM173Q86WV6 379 aaPredicted RBP15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 NELFCDQ8IXH7 590 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 KIAA0895Q8NCT3 520 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 ZMAT2Q96NC0 199 aaKnown RBP15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 GBP4Q96PP9 640 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 COLEC11Q9BWP8 271 aa15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 PRG3Q9Y2Y8 225 aaPredicted RBP15.81■□□□□ 0.12
SQSTM1-205ENST00000464493 MYO7AQ13402 2215 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 TTC26A0AVF1 554 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 CASTOR2A6NHX0 329 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 LACTBL1A8MY62 500 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 TGFB1I1O43294 461 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 CSPG5O95196 566 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 SMC2O95347 1197 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 LDHAP00338 332 aaKnown RBP15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 SNRPFP62306 86 aaKnown RBP15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 POU5F1Q01860 360 aaKnown RBP15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 PPP2R3AQ06190 1150 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 KNOP1Q1ED39 458 aaKnown RBP15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 ARMCX5Q6P1M9 558 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 DDX53Q86TM3 631 aaKnown RBP15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 MICAL1Q8TDZ2 1067 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 BCL7CQ8WUZ0 217 aaPredicted RBP15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 PPM1EQ8WY54 764 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 CBWD1Q9BRT8 395 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 PCIF1Q9H4Z3 704 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 TLR9Q9NR96 1032 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 SLC38A7Q9NVC3 462 aa15.8■□□□□ 0.12
SQSTM1-205ENST00000464493 REV3LO60673 3130 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 KIAA0391O15091 583 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 ADRB2P07550 413 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 ERVFC1P60507 584 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 TIGD5Q53EQ6 642 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 PDE12Q6L8Q7 609 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 CRELD2Q6UXH1 353 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 HS2ST1Q7LGA3 356 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 CD302Q8IX05 232 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 RABGGTAQ92696 567 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 FAM212AQ96EL1 285 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 SAAL1Q96ER3 474 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 GSDMAQ96QA5 445 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 TSPAN18Q96SJ8 248 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 PAAF1Q9BRP4 392 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 FAM213AQ9BRX8 229 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 NSUN3Q9H649 340 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 AGPAT3Q9NRZ7 376 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 RMND1Q9NWS8 449 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 MARCH5Q9NX47 278 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 CGNQ9P2M7 1197 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 CACNG4Q9UBN1 327 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 STK39Q9UEW8 545 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 PCDHA5Q9Y5H7 936 aa15.79■□□□□ 0.12
SQSTM1-205ENST00000464493 F8W810 466 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 EXTL3O43909 919 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms