RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 SNX27Q96L92 541 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 SAMD11Q96NU1 681 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 PRDM12Q9H4Q4 367 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 KIAA1468Q9P260 1216 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 GOLGA8IPA6NC78 632 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 GOLGA8JA6NMD2 632 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 LACTBL1A8MY62 500 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 RB1P06400 928 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 GALTP07902 379 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 KCNE1P15382 129 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 CTNNB1P35222 781 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 BCAR1P56945 870 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 SNRPFP62306 86 aaKnown RBP20.63■□□□□ 0.89
LMNB1-204ENST00000463908 RNASELQ05823 741 aaKnown RBP20.63■□□□□ 0.89
LMNB1-204ENST00000463908 MORC3Q14149 939 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 KYAT1Q16773 422 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 GLRA4Q5JXX5 417 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 ARMCX5Q6P1M9 558 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 KLHL23Q8NBE8 558 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 PPP1R10Q96QC0 940 aaKnown RBP20.63■□□□□ 0.89
LMNB1-204ENST00000463908 FAM213AQ9BRX8 229 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 PLVAPQ9BX97 442 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 PLEKHA5Q9HAU0 1116 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 TOPORSQ9NS56 1045 aaPredicted RBP20.63■□□□□ 0.89
LMNB1-204ENST00000463908 CNTN3Q9P232 1028 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 RWDD3Q9Y3V2 267 aa20.63■□□□□ 0.89
LMNB1-204ENST00000463908 NT5C1B-RDH14C9J2C7 533 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 H3BNC9 293 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 BIN1O00499 593 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 PDXKO00764 312 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 THP07101 528 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 LAG3P18627 525 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 SLC11A1P49279 550 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 GRIK3Q13003 919 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 COBLL1Q53SF7 1204 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 C12orf56Q8IXR9 622 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 FBXO22Q8NEZ5 403 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 GUCD1Q96NT3 240 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 RPS6KC1Q96S38 1066 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 RPF1Q9H9Y2 349 aaKnown RBP20.62■□□□□ 0.89
LMNB1-204ENST00000463908 DMAC2Q9NW81 257 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 HSPBP1Q9NZL4 362 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 CACNG4Q9UBN1 327 aa20.62■□□□□ 0.89
LMNB1-204ENST00000463908 EXTL3O43909 919 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 ZC3H11AO75152 810 aaKnown RBP eCLIP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 LDHAP00338 332 aaKnown RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 ALDH2P05091 517 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 CD44P16070 742 aaKnown RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 WNT7BP56706 349 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 POU5F1Q01860 360 aaKnown RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 SOX4Q06945 474 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 SPAG1Q07617 926 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 ZBTB6Q15916 424 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 TMEM173Q86WV6 379 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 ADSSL1Q8N142 457 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 SLC39A11Q8N1S5 342 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 GPD1LQ8N335 351 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 TMEM130Q8N3G9 435 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 TMEM174Q8WUU8 243 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 P2RX5Q93086 422 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 FBXL18Q96ME1 805 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 ZNF558Q96NG5 402 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 FAM193BQ96PV7 902 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 CDX2Q99626 313 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 PAAF1Q9BRP4 392 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 TMEM175Q9BSA9 504 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 COL25A1Q9BXS0 654 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 NUP62CLQ9H1M0 184 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 AAASQ9NRG9 546 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 CGNQ9P2M7 1197 aaKnown RBP20.61■□□□□ 0.89
LMNB1-204ENST00000463908 TRAF3IP3Q9Y228 551 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 PCDHB12Q9Y5F1 795 aa20.61■□□□□ 0.89
LMNB1-204ENST00000463908 PPP1R3GB7ZBB8 358 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 NRP1O14786 923 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 KIF20AO95235 890 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 ITGB1P05556 798 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 IGFBP6P24592 240 aaPredicted RBP20.6■□□□□ 0.89
LMNB1-204ENST00000463908 ALDH7A1P49419 539 aaKnown RBP20.6■□□□□ 0.89
LMNB1-204ENST00000463908 TUSC3Q13454 348 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 GPM6BQ13491 265 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 ADGRE1Q14246 886 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 HS2ST1Q7LGA3 356 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 CBWD2Q8IUF1 395 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 SPPL3Q8TCT6 385 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 BCL7CQ8WUZ0 217 aaPredicted RBP20.6■□□□□ 0.89
LMNB1-204ENST00000463908 RABGGTAQ92696 567 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 C18orf25Q96B23 403 aaPredicted RBP20.6■□□□□ 0.89
LMNB1-204ENST00000463908 ALG13Q9NP73 1137 aaKnown RBP20.6■□□□□ 0.89
LMNB1-204ENST00000463908 CHD7Q9P2D1 2997 aa20.6■□□□□ 0.89
LMNB1-204ENST00000463908 F8W810 466 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 KIAA0391O15091 583 aaKnown RBP20.59■□□□□ 0.89
LMNB1-204ENST00000463908 GRM6O15303 877 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 FGF18O76093 207 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 DNAJB1P25685 340 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 CYP2J2P51589 502 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 CAMK1Q14012 370 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 ZCWPW2Q504Y3 356 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 CENPPQ6IPU0 288 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 XXYLT1Q8NBI6 393 aa20.59■□□□□ 0.89
LMNB1-204ENST00000463908 RDH13Q8NBN7 331 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms