RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CACNG4Q9UBN1 327 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 NCOR2Q9Y618 2525 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 DOCK8Q8NF50 2099 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 ECI2O75521 394 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 DGAT1O75907 488 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 THP07101 528 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 ARL2P36404 184 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 ADCY1Q08828 1119 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 RAB33AQ14088 237 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 PPP2R5DQ14738 602 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 NPY5RQ15761 445 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 RTL10Q7L3V2 364 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 NPAS3Q8IXF0 933 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 SLFN12Q8IYM2 578 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 HAS1Q92839 578 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 HCFC1R1Q9NWW0 138 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 DNMT3BQ9UBC3 853 aaKnown RBP16.04■□□□□ 0.16
SMC1A-204ENST00000463684 MRPS23Q9Y3D9 190 aaKnown RBP16.04■□□□□ 0.16
SMC1A-204ENST00000463684 FANCMQ8IYD8 2048 aa16.04■□□□□ 0.16
SMC1A-204ENST00000463684 ADAM12O43184 909 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 SLITRK3O94933 977 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 KIF4AO95239 1232 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 OR1D2P34982 312 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 ING5Q8WYH8 240 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 MCRS1Q96EZ8 462 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 PRMT8Q9NR22 394 aaPredicted RBP16.03■□□□□ 0.16
SMC1A-204ENST00000463684 HEBP1Q9NRV9 189 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 ANKEF1Q9NU02 776 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 GDE1Q9NZC3 331 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 KCNJ14Q9UNX9 436 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 CACNA1IQ9P0X4 2223 aa16.03■□□□□ 0.16
SMC1A-204ENST00000463684 MTCL1Q9Y4B5 1905 aaKnown RBP16.02■□□□□ 0.16
SMC1A-204ENST00000463684 MAN2B1O00754 1011 aa16.02■□□□□ 0.16
SMC1A-204ENST00000463684 XBP1P17861 261 aa16.02■□□□□ 0.16
SMC1A-204ENST00000463684 TGM1P22735 817 aa16.02■□□□□ 0.16
SMC1A-204ENST00000463684 GLRA2P23416 452 aa16.02■□□□□ 0.16
SMC1A-204ENST00000463684 MTAPQ13126 283 aa16.02■□□□□ 0.16
SMC1A-204ENST00000463684 ST3GAL2Q16842 350 aa16.02■□□□□ 0.16
SMC1A-204ENST00000463684 TMEM132AQ24JP5 1023 aa16.02■□□□□ 0.16
SMC1A-204ENST00000463684 CELF5Q8N6W0 485 aaKnown RBP16.02■□□□□ 0.16
SMC1A-204ENST00000463684 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.16
SMC1A-204ENST00000463684 EIF2AK1Q9BQI3 630 aaKnown RBP16.02■□□□□ 0.16
SMC1A-204ENST00000463684 CEP250Q9BV73 2442 aa16.02■□□□□ 0.15
SMC1A-204ENST00000463684 LRRIQ4A6NIV6 560 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 ADRB1P08588 477 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 SPIRE1Q08AE8 756 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 SPEM2Q0P670 501 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.01■□□□□ 0.15
SMC1A-204ENST00000463684 PIK3AP1Q6ZUJ8 805 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 DNASE1L2Q92874 299 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 ELSPBP1Q96BH3 223 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 ZNF274Q96GC6 653 aaPredicted RBP16.01■□□□□ 0.15
SMC1A-204ENST00000463684 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 PLA2G2FQ9BZM2 168 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 POLR3FQ9H1D9 316 aaPredicted RBP16.01■□□□□ 0.15
SMC1A-204ENST00000463684 PRMT7Q9NVM4 692 aaPredicted RBP16.01■□□□□ 0.15
SMC1A-204ENST00000463684 SNTG2Q9NY99 539 aa16.01■□□□□ 0.15
SMC1A-204ENST00000463684 NDRG2Q9UN36 371 aaKnown RBP16.01■□□□□ 0.15
SMC1A-204ENST00000463684 TDRD15B5MCY1 1934 aaKnown RBP16■□□□□ 0.15
SMC1A-204ENST00000463684 MIA3Q5JRA6 1907 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 COL4A3Q01955 1670 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 PTGESO14684 152 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 N4BP3O15049 544 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 LYPLA2O95372 231 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 RHOP08100 348 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 PTPN2P17706 415 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 STK3Q13188 491 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 FZD5Q13467 585 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 TOB2Q14106 344 aaPredicted RBP16■□□□□ 0.15
SMC1A-204ENST00000463684 LAIR1Q6GTX8 287 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 TANGO2Q6ICL3 276 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 RUFY3Q7L099 469 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 ZBTB8OSQ8IWT0 167 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 NETO1Q8TDF5 533 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 HSD17B14Q9BPX1 270 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 ADPGKQ9BRR6 497 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 BRD9Q9H8M2 597 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 PARD6AQ9NPB6 346 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 MTRRQ9UBK8 725 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 PCDHA12Q9UN75 941 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 CDY1Q9Y6F8 540 aa16■□□□□ 0.15
SMC1A-204ENST00000463684 GPR179Q6PRD1 2367 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 CACNA1BQ00975 2339 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 TRAPPC3O43617 180 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 LRG1P02750 347 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 FGFR3P22607 806 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 ELF1P32519 619 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 RARRES1P49788 294 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 LPAL2Q16609 132 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 PPM1JQ5JR12 505 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 MAMSTRQ6ZN01 415 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 ANKS3Q6ZW76 656 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 IER2Q9BTL4 223 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 ZFP14Q9HCL3 533 aa15.99■□□□□ 0.15
SMC1A-204ENST00000463684 AVENQ9NQS1 362 aaPredicted RBP15.99■□□□□ 0.15
SMC1A-204ENST00000463684 MYH15Q9Y2K3 1946 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms