RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CXCL8P10145 99 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 PTMSP20962 102 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 ADSSP30520 456 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 ACOT2P49753 483 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 AFF1P51825 1210 aaKnown RBP21.54■■□□□ 1.04
COL9A3-204ENST00000463487 UBE3AQ05086 875 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 TUSC3Q13454 348 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 BMS1Q14692 1282 aaKnown RBP21.54■■□□□ 1.04
COL9A3-204ENST00000463487 XKR4Q5GH76 650 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 GPD1LQ8N335 351 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 KLHL23Q8NBE8 558 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 NOC3LQ8WTT2 800 aaKnown RBP21.54■■□□□ 1.04
COL9A3-204ENST00000463487 UROC1Q96N76 676 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 FAM213AQ9BRX8 229 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 COLEC11Q9BWP8 271 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 LMAN2LQ9H0V9 348 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 CLSTN2Q9H4D0 955 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 HCSTQ9UBK5 93 aa21.54■■□□□ 1.04
COL9A3-204ENST00000463487 KIAA1671Q9BY89 1806 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 SMIM28A0A1B0GU29 152 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 PDXKO00764 312 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 PTGESO14684 152 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 FAM189A1O60320 539 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 FGF18O76093 207 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 IL18RAPO95256 599 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 KCNE1P15382 129 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 HOXD13P35453 343 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 TNFSF9P41273 254 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 OR1G1P47890 313 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 DSC1Q08554 894 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 ENOX2Q16206 610 aaKnown RBP21.53■■□□□ 1.04
COL9A3-204ENST00000463487 CAMK4Q16566 473 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 SLC10A6Q3KNW5 377 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 GLRA4Q5JXX5 417 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 ALKAL1Q6UXT8 129 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 ZNF280BQ86YH2 543 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 C12orf56Q8IXR9 622 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 COLGALT2Q8IYK4 626 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 TRIML1Q8N9V2 468 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 GSTCDQ8NEC7 633 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 GDPD5Q8WTR4 605 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 FAM212AQ96EL1 285 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 CBWD1Q9BRT8 395 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 IKZF4Q9H2S9 585 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 PCIF1Q9H4Z3 704 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 MIOSQ9NXC5 875 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 HSPBP1Q9NZL4 362 aa21.53■■□□□ 1.04
COL9A3-204ENST00000463487 TTC26A0AVF1 554 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 TGFB1I1O43294 461 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 DDHD2O94830 711 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 GALTP07902 379 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 PLCB3Q01970 1234 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 COBLL1Q53SF7 1204 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 SPRED2Q7Z698 418 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 SLC39A11Q8N1S5 342 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 XXYLT1Q8NBI6 393 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 ERCC4Q92889 916 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-204ENST00000463487 SAAL1Q96ER3 474 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 PPP1R10Q96QC0 940 aaKnown RBP21.52■■□□□ 1.04
COL9A3-204ENST00000463487 CDX2Q99626 313 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-204ENST00000463487 ASB7Q9H672 318 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 RBAKQ9NYW8 714 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-204ENST00000463487 LMCD1Q9NZU5 365 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 KIAA1468Q9P260 1216 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 DNAJB4Q9UDY4 337 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 MAN1B1Q9UKM7 699 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 PLAGL2Q9UPG8 496 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 LZTS1Q9Y250 596 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 DERAQ9Y315 318 aa21.52■■□□□ 1.04
COL9A3-204ENST00000463487 ZNF233A6NK53 670 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 PSMA7O14818 248 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 FOSL2P15408 326 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 IGFBP4P22692 258 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 RPL13P26373 211 aaKnown RBP21.51■■□□□ 1.03
COL9A3-204ENST00000463487 SLC11A1P49279 550 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 CYP2J2P51589 502 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 SURF1Q15526 300 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 ZBTB41Q5SVQ8 909 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 NT5DC4Q86YG4 428 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 KIF12Q96FN5 646 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 DDX27Q96GQ7 796 aaKnown RBP21.51■■□□□ 1.03
COL9A3-204ENST00000463487 TSG101Q99816 390 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 KCTD10Q9H3F6 313 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 UBQLN1Q9UMX0 589 aaKnown RBP21.51■■□□□ 1.03
COL9A3-204ENST00000463487 MAPK8IP1Q9UQF2 711 aa21.51■■□□□ 1.03
COL9A3-204ENST00000463487 EPOPA6NHQ4 379 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 LACTBL1A8MY62 500 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 TULP1O00294 542 aaPredicted RBP21.5■■□□□ 1.03
COL9A3-204ENST00000463487 NRP1O14786 923 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 EXOC3O60645 756 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 ITGB1P05556 798 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 ADRB2P07550 413 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 MCM4P33991 863 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 PBX3P40426 434 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 MYBPC2Q14324 1141 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 PDE12Q6L8Q7 609 aaKnown RBP21.5■■□□□ 1.03
COL9A3-204ENST00000463487 BRSK2Q8IWQ3 736 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 IGSF21Q96ID5 467 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 TRAF3IP3Q9Y228 551 aa21.5■■□□□ 1.03
COL9A3-204ENST00000463487 PRG3Q9Y2Y8 225 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms