RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 TMEM260Q9NX78 707 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 IP6K2Q9UHH9 426 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 ZNF112Q9UJU3 913 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 STX8Q9UNK0 236 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
SHQ1-203ENST00000463369 A8MUI8 341 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 ADM5C9JUS6 153 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 NKRFO15226 690 aaKnown RBP eCLIP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 TTLL1O95922 423 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 CALM1P0DP23 149 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 CALM2P0DP24 149 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 CALM3P0DP25 149 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 MSH2P43246 934 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 PPM1FP49593 454 aaPredicted RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 COPS2P61201 443 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 ATP11AP98196 1134 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 BNIP1Q12981 228 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 LBRQ14739 615 aaKnown RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 SHROOM1Q2M3G4 852 aaPredicted RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 VWA3BQ502W6 1294 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 SPDYCQ5MJ68 293 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 ANO7Q6IWH7 933 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 CCDC84Q86UT8 332 aaPredicted RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 BAP1Q92560 729 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 EMID1Q96A84 441 aaPredicted RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 SKA1Q96BD8 255 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 KLHL29Q96CT2 875 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 PBKQ96KB5 322 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 SERINC2Q96SA4 455 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 PAIP2Q9BPZ3 127 aaKnown RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 RAB17Q9H0T7 212 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 LRRC4CQ9HCJ2 640 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 DISC1Q9NRI5 854 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 GINM1Q9NU53 330 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 NYAP2Q9P242 653 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 PACSIN2Q9UNF0 486 aaPredicted RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 ASB3Q9Y575 518 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 AKAP10O43572 662 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 WFS1O76024 890 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 RNF8O76064 485 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 DDAH1O94760 285 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 UPP2O95045 317 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 GH2P01242 217 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 POTEIP0CG38 1075 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 POTEJP0CG39 1038 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 VARSP26640 1264 aaKnown RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 MRPS35P82673 323 aaKnown RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 LACTBP83111 547 aaPredicted RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 MXRA7P84157 204 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 SF3A3Q12874 501 aaKnown RBP eCLIP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 PDIA5Q14554 519 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 NPY5RQ15761 445 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 ARL6IP4Q66PJ3 421 aaKnown RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 NUGGCQ68CJ6 796 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 HGSNATQ68CP4 663 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 PADI6Q6TGC4 694 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 CHRDL2Q6WN34 429 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 SIAH1Q8IUQ4 282 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 GBP7Q8N8V2 638 aaPredicted RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 PNMA1Q8ND90 353 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 PPHLN1Q8NEY8 458 aaKnown RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 ACTRT1Q8TDG2 376 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 TEKT4Q8WW24 435 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 IFT74Q96LB3 600 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 ADAM7Q9H2U9 754 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 MMRN2Q9H8L6 949 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 GGT7Q9UJ14 662 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 CDV3Q9UKY7 258 aaKnown RBP9.32□□□□□ -0.92
SHQ1-203ENST00000463369 ZBTB21Q9ULJ3 1066 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 GTF2A1LQ9UNN4 478 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
SHQ1-203ENST00000463369 GPR182O15218 404 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 DAPK3O43293 454 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 SNX3O60493 162 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 USP2O75604 605 aaPredicted RBP9.31□□□□□ -0.92
SHQ1-203ENST00000463369 FLOT1O75955 427 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 ASNSP08243 561 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 VIMP08670 466 aaKnown RBP9.31□□□□□ -0.92
SHQ1-203ENST00000463369 EEF2P13639 858 aaKnown RBP9.31□□□□□ -0.92
SHQ1-203ENST00000463369 GNAZP19086 355 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 KLRC1P26715 233 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 MCM7P33993 719 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 FUT2Q10981 343 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 SGSM1Q2NKQ1 1148 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 CMPK2Q5EBM0 449 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 DLK2Q6UY11 383 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 ASRGL1Q7L266 308 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 HOOK3Q86VS8 718 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 TTC30AQ86WT1 665 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 B4GALNT2Q8NHY0 566 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 SEC14L1Q92503 715 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 TAF4BQ92750 862 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 KLRG1Q96E93 195 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 PGM2Q96G03 612 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 EDEM3Q9BZQ6 932 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 NSRP1Q9H0G5 558 aaKnown RBP9.31□□□□□ -0.92
SHQ1-203ENST00000463369 NMRK2Q9NPI5 230 aa9.31□□□□□ -0.92
SHQ1-203ENST00000463369 LUC7LQ9NQ29 371 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms