RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 PAEPP09466 180 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 TMEM253P0C7T8 217 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 STAT1P42224 750 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 ATP1A2P50993 1020 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 SMTNP53814 917 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 ZNF844Q08AG5 666 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 MYBPC2Q14324 1141 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 ENOX2Q16206 610 aaKnown RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 CEP85LQ5SZL2 805 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 RUFY4Q6ZNE9 571 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 MMS22LQ6ZRQ5 1243 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 MAATS1Q7Z4T9 603 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 PLEKHH3Q7Z736 793 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 CCDC26Q8TAB7 109 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 ZNF473Q8WTR7 871 aaKnown RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 HVCN1Q96D96 273 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 CBWD1Q9BRT8 395 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 STK33Q9BYT3 514 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 VTA1Q9NP79 307 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 SLC12A6Q9UHW9 1150 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 CPA4Q9UI42 421 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 TBX20Q9UMR3 447 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-204ENST00000461897 GOLGA6L10A6NI86 522 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 SNAI1O95863 264 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-204ENST00000461897 FAM107AO95990 144 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 MYZAPP0CAP1 466 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 MARK3P27448 753 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 MAPK4P31152 587 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 SOX5P35711 763 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
COL4A6-204ENST00000461897 GUCY1A3Q02108 690 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-204ENST00000461897 TCERG1LQ5VWI1 586 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 TTC19Q6DKK2 380 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-204ENST00000461897 MAMDC4Q6UXC1 1216 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 TAS1R3Q7RTX0 852 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 MICALL1Q8N3F8 863 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 LNX1Q8TBB1 728 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-204ENST00000461897 MYCBPAPQ8TBZ2 947 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 TMEM143Q96AN5 459 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 MAML3Q96JK9 1138 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 FAM114A2Q9NRY5 505 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-204ENST00000461897 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 CENPFP49454 3210 aa13.39□□□□□ -0.27
COL4A6-204ENST00000461897 DOCK3Q8IZD9 2030 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 RBM47A0AV96 593 aaKnown RBP13.38□□□□□ -0.27
COL4A6-204ENST00000461897 F8VZ95 297 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 KRIT1O00522 736 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 EXOC3O60645 756 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 SLC10A3P09131 477 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 FNTAP49354 379 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 GALCP54803 685 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 HADHBP55084 474 aaKnown RBP13.38□□□□□ -0.27
COL4A6-204ENST00000461897 HLTFQ14527 1009 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL4A6-204ENST00000461897 TCEAL1Q15170 157 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 CLUL1Q15846 466 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 DPP9Q86TI2 863 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 NLRP14Q86W24 1093 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 CNPY4Q8N129 248 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 ZSWIM2Q8NEG5 633 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 ASAP3Q8TDY4 903 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 SLC7A3Q8WY07 619 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 KAT2BQ92831 832 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 GLG1Q92896 1179 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 FAM167AQ96KS9 214 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 CCT8L2Q96SF2 557 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 TXLNGYQ9BZA5 131 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 NEUROG2Q9H2A3 272 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 AMFRQ9UKV5 643 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 FRMD4BQ9Y2L6 1034 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 DDX3YO15523 660 aaKnown RBP13.38□□□□□ -0.27
COL4A6-204ENST00000461897 EVI5O60447 810 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 RFX1P22670 979 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 GLRA2P23416 452 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 ADSSP30520 456 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 ARL2P36404 184 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 RFC5P40937 340 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 LIG3P49916 1009 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 SNRPFP62306 86 aaKnown RBP13.38□□□□□ -0.27
COL4A6-204ENST00000461897 DRP2Q13474 957 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 PPP2R5AQ15172 486 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 SLC39A4Q6P5W5 647 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 C6orf89Q6UWU4 347 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 PLPPR4Q7Z2D5 763 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 TMC3Q7Z5M5 1100 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 NPLOC4Q8TAT6 608 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 IFT74Q96LB3 600 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 DDX47Q9H0S4 455 aaKnown RBP13.38□□□□□ -0.27
COL4A6-204ENST00000461897 CARD9Q9H257 536 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms