RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 CKAP4Q07065 602 aaKnown RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 TRPC3Q13507 836 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 BMS1Q14692 1282 aaKnown RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 KIF22Q14807 665 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 SURF1Q15526 300 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 CCL14Q16627 93 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 ASTE1Q2TB18 679 aaPredicted RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 C1orf220Q5T0J3 134 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 TAF3Q5VWG9 929 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 CDCA2Q69YH5 1023 aaPredicted RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 PHLDB3Q6NSJ2 640 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 DPY19L2P1Q6NXN4 242 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 ALKBH5Q6P6C2 394 aaKnown RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 MTHFD1LQ6UB35 978 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 MPZL3Q6UWV2 235 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 C17orf99Q6UX52 265 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 ZNF662Q6ZS27 426 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 H2AFVQ71UI9 128 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 SV2AQ7L0J3 742 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 IRF2BP2Q7Z5L9 587 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 THNSL1Q8IYQ7 743 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 TAS1R2Q8TE23 839 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 GOLGA1Q92805 767 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 SEMA4DQ92854 862 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 CAPZA3Q96KX2 299 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 FAM81BQ96LP2 452 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 FBXL18Q96ME1 805 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 CGRRF1Q99675 332 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 ACO2Q99798 780 aaKnown RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 AGPAT1Q99943 283 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 PI4K2AQ9BTU6 479 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 IMPG2Q9BZV3 1241 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 KATNBL1Q9H079 304 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 FAM49AQ9H0Q0 323 aaPredicted RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 PDCL3Q9H2J4 239 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 L2HGDHQ9H9P8 463 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 RPF1Q9H9Y2 349 aaKnown RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 PRMT7Q9NVM4 692 aaPredicted RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 RAB20Q9NX57 234 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 PUF60Q9UHX1 559 aaKnown RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 CDC23Q9UJX2 597 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 GINS2Q9Y248 185 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 DUSP10Q9Y6W6 482 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 PASKQ96RG2 1323 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 DOCK3Q8IZD9 2030 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 MYH10P35580 1976 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 A0A087WZ62 844 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CTAGE15A4D2H0 777 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 RBAK-RBAKDNI3L0D1 243 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 ACKR2O00590 384 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 PJA2O43164 708 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 B4GALT5O43286 388 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CTIFO43310 598 aaKnown RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 ZC3H11AO75152 810 aaKnown RBP eCLIP7.32□□□□□ -1.24
MSH2-204ENST00000461394 ATP1A1P05023 1023 aaKnown RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 EDN1P05305 212 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CTAGE8P0CG41 777 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CYP2C9P11712 490 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 TNFSF9P41273 254 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 PSEN2P49810 448 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 PDE6CP51160 858 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 DNA2P51530 1060 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 PTENP60484 403 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 TFAMQ00059 246 aaKnown RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 MBTD1Q05BQ5 628 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 ENPEPQ07075 957 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 NCBP1Q09161 790 aaKnown RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 ELF2Q15723 593 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 NAB2Q15742 525 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 WHAMMP3Q1A5X7 153 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 TUSC1Q2TAM9 212 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 ZBTB41Q5SVQ8 909 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CCDC181Q5TID7 509 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 MFSD14CQ5VZR4 134 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 OLFML2BQ68BL8 750 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CYP4F22Q6NT55 531 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 ENOSF1Q7L5Y1 443 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 APBB1IPQ7Z5R6 666 aaPredicted RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 CTAGE6Q86UF2 777 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CDR2LQ86X02 465 aaPredicted RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 GLYCTKQ8IVS8 523 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 BRSK2Q8IWQ3 736 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CTAGE4Q8IX94 777 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 RPUSD2Q8IZ73 545 aaKnown RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 RNF10Q8N5U6 811 aaKnown RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 LMO3Q8TAP4 145 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 PPP1R13LQ8WUF5 828 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CTNNBL1Q8WYA6 563 aaPredicted RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 TAF4BQ92750 862 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 KAT5Q92993 513 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 ELMO3Q96BJ8 720 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 LENG1Q96BZ8 264 aaPredicted RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 ANKRD36BP1Q96IX9 119 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 CPB2Q96IY4 423 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 FAM84AQ96KN4 292 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 FDXACB1Q9BRP7 624 aaPredicted RBP7.32□□□□□ -1.24
MSH2-204ENST00000461394 ADPGKQ9BRR6 497 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 C16orf70Q9BSU1 422 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 PACSIN1Q9BY11 444 aa7.32□□□□□ -1.24
MSH2-204ENST00000461394 HAPLN2Q9GZV7 340 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms