RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 C8orf34Q49A92 452 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 XKR9Q5GH70 373 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 PRR23CQ6ZRP0 262 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 C4orf19Q8IY42 314 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 HASPINQ8TF76 798 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 HCFC1R1Q9NWW0 138 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 KLK14Q9P0G3 267 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 DNMT3BQ9UBC3 853 aaKnown RBP19.11■□□□□ 0.65
TOP3A-202ENST00000461127 PCDHA4Q9UN74 947 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 RALGAPA1Q6GYQ0 2036 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 BAHCC1Q9P281 2608 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 FAM208BQ5VWN6 2430 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 NID2Q14112 1375 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 EIF5BO60841 1220 aaKnown RBP19.1■□□□□ 0.65
TOP3A-202ENST00000461127 TDGF1P13385 188 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 ARF4P18085 180 aaPredicted RBP19.1■□□□□ 0.65
TOP3A-202ENST00000461127 POU5F1BQ06416 359 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 SIM2Q14190 667 aaPredicted RBP19.1■□□□□ 0.65
TOP3A-202ENST00000461127 CSRP2Q16527 193 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 SLC27A1Q6PCB7 646 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 Q6ZUG5 572 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 RASEFQ8IZ41 740 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 BRF1Q92994 677 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 ELSPBP1Q96BH3 223 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 MCRS1Q96EZ8 462 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 LXNQ9BS40 222 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 BRD9Q9H8M2 597 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 ATRXP46100 2492 aa19.1■□□□□ 0.65
TOP3A-202ENST00000461127 NPTXRO95502 500 aa19.09■□□□□ 0.65
TOP3A-202ENST00000461127 MBTD1Q05BQ5 628 aa19.09■□□□□ 0.65
TOP3A-202ENST00000461127 RAB33AQ14088 237 aa19.09■□□□□ 0.65
TOP3A-202ENST00000461127 IL31Q6EBC2 164 aa19.09■□□□□ 0.65
TOP3A-202ENST00000461127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.09■□□□□ 0.65
TOP3A-202ENST00000461127 IFNLR1Q8IU57 520 aaPredicted RBP19.09■□□□□ 0.65
TOP3A-202ENST00000461127 FAM20AQ96MK3 541 aa19.09■□□□□ 0.65
TOP3A-202ENST00000461127 PAAF1Q9BRP4 392 aa19.09■□□□□ 0.65
TOP3A-202ENST00000461127 PLA2G2FQ9BZM2 168 aa19.09■□□□□ 0.65
TOP3A-202ENST00000461127 WRAP73Q9P2S5 460 aaPredicted RBP19.09■□□□□ 0.65
TOP3A-202ENST00000461127 CACNG4Q9UBN1 327 aa19.09■□□□□ 0.65
TOP3A-202ENST00000461127 CASTOR2A6NHX0 329 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 KIF4AO95239 1232 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 RHOP08100 348 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 IFNAR1P17181 557 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 OR1D2P34982 312 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 NTRK3Q16288 839 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 TANGO2Q6ICL3 276 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 TRIM22Q8IYM9 498 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 BACH2Q9BYV9 841 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 VAV3Q9UKW4 847 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 NOTCH4Q99466 2003 aa19.08■□□□□ 0.64
TOP3A-202ENST00000461127 ADAM12O43184 909 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 MARCH6O60337 910 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 CNR2P34972 360 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 CXCL12P48061 93 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 EPHA7Q15375 998 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 AMHR2Q16671 573 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.07■□□□□ 0.64
TOP3A-202ENST00000461127 BLIDQ8IZY5 108 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 IRF7Q92985 503 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 TRMT61BQ9BVS5 477 aaKnown RBP19.07■□□□□ 0.64
TOP3A-202ENST00000461127 NFKBIZQ9BYH8 718 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 ZSWIM4Q9H7M6 989 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 LMAN1LQ9HAT1 526 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 ZFP14Q9HCL3 533 aa19.07■□□□□ 0.64
TOP3A-202ENST00000461127 AVENQ9NQS1 362 aaPredicted RBP19.07■□□□□ 0.64
TOP3A-202ENST00000461127 A0A1B0GUA9 196 aa19.06■□□□□ 0.64
TOP3A-202ENST00000461127 SLC37A4O43826 429 aa19.06■□□□□ 0.64
TOP3A-202ENST00000461127 THP07101 528 aa19.06■□□□□ 0.64
TOP3A-202ENST00000461127 PTPN2P17706 415 aa19.06■□□□□ 0.64
TOP3A-202ENST00000461127 CDR2LQ86X02 465 aaPredicted RBP19.06■□□□□ 0.64
TOP3A-202ENST00000461127 FAM3CQ92520 227 aa19.06■□□□□ 0.64
TOP3A-202ENST00000461127 SHISA7A6NL88 538 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 B4GALT5O43286 388 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 LRG1P02750 347 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 CEBPBP17676 345 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 CAPSQ13938 189 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 GRM2Q14416 872 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 INF2Q27J81 1249 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 GALNT17Q6IS24 598 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 KRT25Q7Z3Z0 450 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 ZNF687Q8N1G0 1237 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 CCDC43Q96MW1 224 aaKnown RBP19.05■□□□□ 0.64
TOP3A-202ENST00000461127 KCNMB3Q9NPA1 279 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 XPNPEP1Q9NQW7 623 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 RGL1Q9NZL6 768 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 MTRRQ9UBK8 725 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 CDY1Q9Y6F8 540 aa19.05■□□□□ 0.64
TOP3A-202ENST00000461127 ARID2Q68CP9 1835 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 GDF9O60383 454 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 CPA1P15085 419 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 ELF1P32519 619 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 SHC2P98077 582 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 SSRP1Q08945 709 aaKnown RBP19.04■□□□□ 0.64
TOP3A-202ENST00000461127 SPIRE1Q08AE8 756 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 SLC5A9Q2M3M2 681 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 AASDHQ4L235 1098 aaPredicted RBP19.04■□□□□ 0.64
TOP3A-202ENST00000461127 NCAPH2Q6IBW4 605 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 DAGLBQ8NCG7 672 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 DYDC2Q96IM9 177 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 TRPV5Q9NQA5 729 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms