RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ANKRD63C9JTQ0 380 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 CLIC2O15247 247 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 ATP2A2P16615 1042 aaKnown RBP11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 BMP6P22004 513 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 ZNF445P59923 1031 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 RNASELQ05823 741 aaKnown RBP11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 CCDC40Q4G0X9 1142 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 ANO6Q4KMQ2 910 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 ZCWPW2Q504Y3 356 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 ANKRD40Q6AI12 368 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 FRMD5Q7Z6J6 570 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 FAM186BQ8IYM0 893 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 GLIS3Q8NEA6 775 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 FBXL18Q96ME1 805 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 GDF15Q99988 308 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 CBWD1Q9BRT8 395 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 FGFBP2Q9BYJ0 223 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 SEMA6BQ9H3T3 888 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 PCIF1Q9H4Z3 704 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 DMAC2Q9NW81 257 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 SNTG2Q9NY99 539 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 CPSF3Q9UKF6 684 aaKnown RBP11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 RWDD3Q9Y3V2 267 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 C2CD2Q9Y426 696 aa11.97□□□□□ -0.49
SMNDC1-203ENST00000460483 ARHGEF37A1IGU5 675 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 C2orf72A6NCS6 295 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 TPM3P06753 285 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 THP07101 528 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 EEF1GP26641 437 aaKnown RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 ADSSP30520 456 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 HOXD13P35453 343 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 OSTNP61366 133 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 GRIK3Q13003 919 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 NOMO2Q5JPE7 1267 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 UBXN11Q5T124 520 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 EEF1DP3Q658K8 133 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 TTI2Q6NXR4 508 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 CDR2LQ86X02 465 aaPredicted RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 TDHQ8IZJ6 230 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 LRRC43Q8N309 656 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 CCDC150Q8NCX0 1101 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 BEST2Q8NFU1 509 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 FAM200AQ8TCP9 573 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 ZBTB45Q96K62 511 aaPredicted RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 UROC1Q96N76 676 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 RAD9AQ99638 391 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 APOL6Q9BWW8 343 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 SRRTQ9BXP5 876 aaKnown RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 EIF2AQ9BY44 585 aaKnown RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 DNAJC25Q9H1X3 360 aa11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 NXF3Q9H4D5 531 aaKnown RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 UBQLN1Q9UMX0 589 aaKnown RBP11.96□□□□□ -0.49
SMNDC1-203ENST00000460483 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 ABLIM1O14639 778 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 TLL1O43897 1013 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 MGEA5O60502 916 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 N4BP1O75113 896 aaKnown RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 RECQL4O94761 1208 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 UPP2O95045 317 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 GJB5O95377 273 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 TNNC2P02585 160 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 KCNE1P15382 129 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 ATF7P17544 494 aaPredicted RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 TNNI1P19237 187 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 CYP3A5P20815 502 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 IBSPP21815 317 aaPredicted RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 GTF2H1P32780 548 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 ACOT2P49753 483 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 STX17P56962 302 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 BMS1Q14692 1282 aaKnown RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 PSMD6Q15008 389 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 RAB30Q15771 203 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 DUOXA2Q1HG44 320 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 FILIP1LQ4L180 1135 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 SLC39A4Q6P5W5 647 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 C16orf59Q7L2K0 433 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 ZNF598Q86UK7 904 aaKnown RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 RTN4RL1Q86UN2 441 aaPredicted RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 WDR49Q8IV35 697 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 BRSK2Q8IWQ3 736 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 CMTR2Q8IYT2 770 aaKnown RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 SMG8Q8ND04 991 aaKnown RBP11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 SAAL1Q96ER3 474 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 ANKRD36BP1Q96IX9 119 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 DNAI2Q9GZS0 605 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 CNTN3Q9P232 1028 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 MSRAQ9UJ68 235 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 NFE2L3Q9Y4A8 694 aa11.95□□□□□ -0.5
SMNDC1-203ENST00000460483 ARL5CA6NH57 179 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 INPPL1O15357 1258 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 DGKIO75912 1065 aa11.94□□□□□ -0.5
SMNDC1-203ENST00000460483 TMEM191BP0C7N4 346 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms