RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 C5orf67F2Z3F1 127 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 F8W810 466 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 RFXAPO00287 272 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 CLTAP09496 248 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 GARTP22102 1010 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 SLC11A1P49279 550 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 ACOT2P49753 483 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 BCAR1P56945 870 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 PPP2R3AQ06190 1150 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 KNOP1Q1ED39 458 aaKnown RBP13.98□□□□□ -0.17
COL18A1-206ENST00000459895 SLC10A6Q3KNW5 377 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 SLFN12LQ6IEE8 588 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 CRELD2Q6UXH1 353 aaPredicted RBP13.98□□□□□ -0.17
COL18A1-206ENST00000459895 NOC3LQ8WTT2 800 aaKnown RBP13.98□□□□□ -0.17
COL18A1-206ENST00000459895 ZMAT2Q96NC0 199 aaKnown RBP13.98□□□□□ -0.17
COL18A1-206ENST00000459895 ZNF558Q96NG5 402 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 ACAP3Q96P50 834 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 PPP1R10Q96QC0 940 aaKnown RBP13.98□□□□□ -0.17
COL18A1-206ENST00000459895 FAM213AQ9BRX8 229 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 NUP62CLQ9H1M0 184 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 SEMA6BQ9H3T3 888 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 PCIF1Q9H4Z3 704 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 GOLGA2P5Q9HBQ8 144 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 MARCH5Q9NX47 278 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 HSPBP1Q9NZL4 362 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 TUBGCP4Q9UGJ1 667 aa13.98□□□□□ -0.17
COL18A1-206ENST00000459895 TTC26A0AVF1 554 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 CASTOR2A6NHX0 329 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 BIN1O00499 593 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 CLIC2O15247 247 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 LPXNO60711 386 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 ITGB1P05556 798 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 ADRB2P07550 413 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 NFICP08651 508 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 BMP6P22004 513 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 MCM4P33991 863 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 BMPR1AP36894 532 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 CYP2J2P51589 502 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 SOX4Q06945 474 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-206ENST00000459895 SPAG1Q07617 926 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 ZCWPW2Q504Y3 356 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 XKR4Q5GH76 650 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 ZNF658Q5TYW1 1059 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-206ENST00000459895 ISM2Q6H9L7 571 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 KCNT2Q6UVM3 1135 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 HS2ST1Q7LGA3 356 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 BRSK2Q8IWQ3 736 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 COLGALT2Q8IYK4 626 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 SLC39A11Q8N1S5 342 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 GUF1Q8N442 669 aaKnown RBP13.97□□□□□ -0.17
COL18A1-206ENST00000459895 KLHL23Q8NBE8 558 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 MYLIPQ8WY64 445 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 FAM84AQ96KN4 292 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 PAAF1Q9BRP4 392 aa13.97□□□□□ -0.17
COL18A1-206ENST00000459895 C11orf84Q9BUA3 381 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-206ENST00000459895 PRG3Q9Y2Y8 225 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-206ENST00000459895 SMIM28A0A1B0GU29 152 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 NT5C1B-RDH14C9J2C7 533 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 MBD3O95983 291 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 KCNE1P15382 129 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 PPM1AP35813 382 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 TUSC3Q13454 348 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 MORC3Q14149 939 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 ADGRE1Q14246 886 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 KYAT1Q16773 422 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 ALKAL1Q6UXT8 129 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 CBWD2Q8IUF1 395 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 C12orf56Q8IXR9 622 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 EFCAB13Q8IY85 973 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 GPD1LQ8N335 351 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 RABGGTAQ92696 567 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 C18orf25Q96B23 403 aaPredicted RBP13.96□□□□□ -0.17
COL18A1-206ENST00000459895 PLVAPQ9BX97 442 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 RPF1Q9H9Y2 349 aaKnown RBP13.96□□□□□ -0.17
COL18A1-206ENST00000459895 AAASQ9NRG9 546 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 MTMR10Q9NXD2 777 aa13.96□□□□□ -0.17
COL18A1-206ENST00000459895 RBAKQ9NYW8 714 aaPredicted RBP13.96□□□□□ -0.17
COL18A1-206ENST00000459895 PTPRJQ12913 1337 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 LACTBL1A8MY62 500 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 H3BNC9 293 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 GRM6O15303 877 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 EXTL3O43909 919 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 FGF18O76093 207 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 KIF4AO95239 1232 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 NR3C1P04150 777 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 THP07101 528 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 CD44P16070 742 aaKnown RBP13.95□□□□□ -0.18
COL18A1-206ENST00000459895 DNAJB1P25685 340 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 PRCPP42785 496 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 OR1G1P47890 313 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 GUCY2FP51841 1108 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 GPM6BQ13491 265 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 COBLL1Q53SF7 1204 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 HASPINQ8TF76 798 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 P2RX5Q93086 422 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 FAM193BQ96PV7 902 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-206ENST00000459895 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-206ENST00000459895 TMEM175Q9BSA9 504 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 VN1R3Q9BXE9 311 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms