RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ZC3H11AO75152 810 aaKnown RBP eCLIP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 MYCNP04198 464 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 PLEKP08567 350 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 STAT1P42224 750 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 CRYBB1P53674 252 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 SNX17Q15036 470 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 CATSPER4Q7RTX7 472 aa26.41■■□□□ 1.82
U2AF1-204ENST00000459639 APBB1IPQ7Z5R6 666 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 C16orf45Q96MC5 204 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 EIF3CQ99613 913 aaKnown RBP26.41■■□□□ 1.82
U2AF1-204ENST00000459639 RALGAPA2Q2PPJ7 1873 aa26.4■■□□□ 1.82
U2AF1-204ENST00000459639 IL18RAPO95256 599 aa26.4■■□□□ 1.82
U2AF1-204ENST00000459639 EIF4A3P38919 411 aaKnown RBP26.4■■□□□ 1.82
U2AF1-204ENST00000459639 DCAF4L1Q3SXM0 396 aa26.4■■□□□ 1.82
U2AF1-204ENST00000459639 TDRD12Q587J7 1177 aaKnown RBP26.4■■□□□ 1.82
U2AF1-204ENST00000459639 FAM47CQ5HY64 1035 aa26.4■■□□□ 1.82
U2AF1-204ENST00000459639 TDRD10Q5VZ19 366 aaKnown RBP26.4■■□□□ 1.82
U2AF1-204ENST00000459639 LMBRD2Q68DH5 695 aaPredicted RBP26.4■■□□□ 1.82
U2AF1-204ENST00000459639 RSPH3Q86UC2 560 aa26.4■■□□□ 1.82
U2AF1-204ENST00000459639 CEP120Q8N960 986 aa26.4■■□□□ 1.82
U2AF1-204ENST00000459639 ACRBPQ8NEB7 543 aa26.4■■□□□ 1.82
U2AF1-204ENST00000459639 NT5C1BQ96P26 610 aa26.4■■□□□ 1.82
U2AF1-204ENST00000459639 BZW2Q9Y6E2 419 aaKnown RBP26.4■■□□□ 1.82
U2AF1-204ENST00000459639 CLTAP09496 248 aa26.39■■□□□ 1.82
U2AF1-204ENST00000459639 FERP16591 822 aa26.39■■□□□ 1.82
U2AF1-204ENST00000459639 PRKCIP41743 596 aa26.39■■□□□ 1.82
U2AF1-204ENST00000459639 DRAP1Q14919 205 aaPredicted RBP26.39■■□□□ 1.82
U2AF1-204ENST00000459639 PTPN14Q15678 1187 aa26.39■■□□□ 1.82
U2AF1-204ENST00000459639 ENOX2Q16206 610 aaKnown RBP26.39■■□□□ 1.82
U2AF1-204ENST00000459639 SERINC5Q86VE9 423 aa26.39■■□□□ 1.82
U2AF1-204ENST00000459639 ARHGEF19Q8IW93 802 aa26.39■■□□□ 1.82
U2AF1-204ENST00000459639 TSEN34Q9BSV6 310 aaKnown RBP26.39■■□□□ 1.82
U2AF1-204ENST00000459639 DEF6Q9H4E7 631 aa26.39■■□□□ 1.82
U2AF1-204ENST00000459639 RPF1Q9H9Y2 349 aaKnown RBP26.39■■□□□ 1.82
U2AF1-204ENST00000459639 TSKSQ9UJT2 592 aa26.39■■□□□ 1.82
U2AF1-204ENST00000459639 CITO14578 2027 aa26.39■■□□□ 1.81
U2AF1-204ENST00000459639 MOXD2PA6NHM9 499 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 LRRN2O75325 713 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 IPO7O95373 1038 aaKnown RBP26.38■■□□□ 1.81
U2AF1-204ENST00000459639 FGFR4P22455 802 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 AXLP30530 894 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 SOX5P35711 763 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 KIF11P52732 1056 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 ACLYP53396 1101 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 KRT83P78385 493 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 KLHL30Q0D2K2 578 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 LHX8Q68G74 356 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 IRF2BP2Q7Z5L9 587 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 UBE2TQ9NPD8 197 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-204ENST00000459639 KIF2AO00139 706 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-204ENST00000459639 B4GALT4O60513 344 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 STAG3L1P0CL83 205 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 MRPS6P82932 125 aaKnown RBP26.38■■□□□ 1.81
U2AF1-204ENST00000459639 PTPN11Q06124 597 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-204ENST00000459639 BIRC3Q13489 604 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 ASTE1Q2TB18 679 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-204ENST00000459639 RPAINQ86UA6 219 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 FAM81BQ96LP2 452 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 CELF4Q9BZC1 486 aaKnown RBP26.38■■□□□ 1.81
U2AF1-204ENST00000459639 GPR88Q9GZN0 384 aa26.38■■□□□ 1.81
U2AF1-204ENST00000459639 REXO2Q9Y3B8 237 aaKnown RBP26.38■■□□□ 1.81
U2AF1-204ENST00000459639 GRIN2DO15399 1336 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 M0QZ92 97 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 LCA5LO95447 670 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 HLA-DRAP01903 254 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 HOXA11P31270 313 aaPredicted RBP26.37■■□□□ 1.81
U2AF1-204ENST00000459639 PIK3CAP42336 1068 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 OSTNP61366 133 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 DNTTIP2Q5QJE6 756 aaKnown RBP26.37■■□□□ 1.81
U2AF1-204ENST00000459639 NOTUMQ6P988 496 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 OR5B17Q8NGF7 314 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 TMEM40Q8WWA1 233 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 TRPV2Q9Y5S1 764 aa26.37■■□□□ 1.81
U2AF1-204ENST00000459639 AKR1B10O60218 316 aa26.36■■□□□ 1.81
U2AF1-204ENST00000459639 CCDC172P0C7W6 258 aa26.36■■□□□ 1.81
U2AF1-204ENST00000459639 CXCL8P10145 99 aa26.36■■□□□ 1.81
U2AF1-204ENST00000459639 HSPA6P17066 643 aa26.36■■□□□ 1.81
U2AF1-204ENST00000459639 ARID5AQ03989 594 aa26.36■■□□□ 1.81
U2AF1-204ENST00000459639 SLC27A1Q6PCB7 646 aa26.36■■□□□ 1.81
U2AF1-204ENST00000459639 GPIHBP1Q8IV16 184 aa26.36■■□□□ 1.81
U2AF1-204ENST00000459639 FAM212AQ96EL1 285 aa26.36■■□□□ 1.81
U2AF1-204ENST00000459639 OFD1O75665 1012 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 VNN1O95497 513 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 TUBB4AP04350 444 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 ANXA13P27216 316 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 GRM5P41594 1212 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 MFAP3P55082 362 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 ITGA7Q13683 1181 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 ARHGAP44Q17R89 818 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 DUOXA2Q1HG44 320 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.35■■□□□ 1.81
U2AF1-204ENST00000459639 TMEM192Q8IY95 271 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 PPM1KQ8N3J5 372 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 HELQQ8TDG4 1101 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 FAM84AQ96KN4 292 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 C1orf112Q9NSG2 853 aa26.35■■□□□ 1.81
U2AF1-204ENST00000459639 GFPT2O94808 682 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 TNNT1P13805 278 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 SPA17Q15506 151 aa26.34■■□□□ 1.81
U2AF1-204ENST00000459639 WDR44Q5JSH3 913 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms