RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 AKT3Q9Y243 479 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 STYXL1Q9Y6J8 313 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 SCN10AQ9Y5Y9 1956 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 XIRP2A4UGR9 3374 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 ANK1P16157 1881 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 A0A1W2PQ45 241 aaPredicted RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 A0A1W2PQY0 241 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 ZNF233A6NK53 670 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 PMM2O15305 246 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 MAP3K7O43318 606 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 EXTL3O43909 919 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 ADAMTS4O75173 837 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 TOM1L1O75674 476 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 MYL3P08590 195 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 CCDC175P0C221 793 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 RARBP10826 455 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 BMP1P13497 986 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 RAG1P15918 1043 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 KLRC1P26715 233 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 CYLC1P35663 651 aaPredicted RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 FMO5P49326 533 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 CLCN3P51790 818 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 IGBP1P78318 339 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 CDK17Q00537 523 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 PCBP1Q15365 356 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS50-207ENST00000458530 KYAT1Q16773 422 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 TMEM240Q5SV17 173 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 PRAMEF19Q5SWL8 479 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 MTHFD1LQ6UB35 978 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 LRRC71Q8N4P6 559 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 SYN2Q92777 582 aaPredicted RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 BORCS6Q96GS4 357 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 FAM81BQ96LP2 452 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 NLRP4Q96MN2 994 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 SCLT1Q96NL6 688 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 C1QTNF1Q9BXJ1 281 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 UPF3AQ9H1J1 476 aaKnown RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 PCIF1Q9H4Z3 704 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 CXXC1Q9P0U4 656 aaPredicted RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 FBXL5Q9UKA1 691 aa9.7□□□□□ -0.86
VPS50-207ENST00000458530 AGO2Q9UKV8 859 aaKnown RBP9.7□□□□□ -0.86
VPS50-207ENST00000458530 ANKRD63C9JTQ0 380 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 INO80B-WBP1J3KQ70 363 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 TRANK1O15050 2925 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 CLDN3O15551 220 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 TIMP1P01033 207 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 CCDC172P0C7W6 258 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 SRGAP2CP0DJJ0 459 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 SMIM10L2AP0DMW4 78 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 SMIM10L2BP0DMW5 78 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 MXI1P50539 228 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 CDK7P50613 346 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 AP3M2P53677 418 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 GJA9P57773 515 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 PTENP60484 403 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 CYP24A1Q07973 514 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 NCBP1Q09161 790 aaKnown RBP9.69□□□□□ -0.86
VPS50-207ENST00000458530 PRPF4BQ13523 1007 aaKnown RBP9.69□□□□□ -0.86
VPS50-207ENST00000458530 SURF1Q15526 300 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 MEA1Q16626 185 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 PTPN21Q16825 1174 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 FAM187BQ17R55 369 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 KIAA0753Q2KHM9 967 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 DNTTIP2Q5QJE6 756 aaKnown RBP9.69□□□□□ -0.86
VPS50-207ENST00000458530 TMEM63BQ5T3F8 832 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 SFMBT2Q5VUG0 894 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 MFSD5Q6N075 450 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 TAS1R3Q7RTX0 852 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 SRGAP1Q7Z6B7 1085 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 TMEM139Q8IV31 216 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 CCDC170Q8IYT3 715 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 CCAR2Q8N163 923 aaKnown RBP9.69□□□□□ -0.86
VPS50-207ENST00000458530 LINC01465Q8N7H1 131 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 KLHDC9Q8NEP7 349 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 TRAPPC12Q8WVT3 735 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 SPAG5Q96R06 1193 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 FNBP1Q96RU3 617 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 GAS2L1Q99501 681 aaPredicted RBP9.69□□□□□ -0.86
VPS50-207ENST00000458530 MTG1Q9BT17 334 aaPredicted RBP9.69□□□□□ -0.86
VPS50-207ENST00000458530 MSTO1Q9BUK6 570 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 INO80BQ9C086 356 aaPredicted RBP9.69□□□□□ -0.86
VPS50-207ENST00000458530 CCDC113Q9H0I3 377 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 PRDM12Q9H4Q4 367 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 LUC7LQ9NQ29 371 aaKnown RBP9.69□□□□□ -0.86
VPS50-207ENST00000458530 XPNPEP3Q9NQH7 507 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 ANKFY1Q9P2R3 1169 aa9.69□□□□□ -0.86
VPS50-207ENST00000458530 REV3LO60673 3130 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 A0A0B4J269 797 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 SMIM35A0A1B0GVV1 85 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 GOLGA8CPA6NN73 597 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 HAS3O00219 553 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 ACKR2O00590 384 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 ADCY6O43306 1168 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 ERLIN2O94905 339 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 C6orf222P0C671 652 aaPredicted RBP9.68□□□□□ -0.86
VPS50-207ENST00000458530 ANXA13P27216 316 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 ADSSP30520 456 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms