RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ZNF623O75123 536 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 CLTAP09496 248 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 ATP2A2P16615 1042 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 RPL13P26373 211 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 ERCC5P28715 1186 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 PPP1R2P41236 205 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 ZNF165P49910 485 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 RAB27AP51159 221 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 GUCY2FP51841 1108 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 YARSP54577 528 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 DLG4P78352 724 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 FKBP3Q00688 224 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 LRRC63Q05C16 580 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 SNRNP35Q16560 246 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 EDRF1Q3B7T1 1238 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 LRSAM1Q6UWE0 723 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 LRRC55Q6ZSA7 311 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 APBB1IPQ7Z5R6 666 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 NPAS4Q8IUM7 802 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 C12orf56Q8IXR9 622 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 CRIPAKQ8N1N5 446 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 C18orf25Q96B23 403 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 CASD1Q96PB1 797 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 TRAIPQ9BWF2 469 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 TSPY26PQ9H489 355 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 MMRN2Q9H8L6 949 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 RSAD1Q9HA92 442 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 TOPORSQ9NS56 1045 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 FANCLQ9NW38 375 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 RBAKQ9NYW8 714 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 PLAGL2Q9UPG8 496 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 NFE2L3Q9Y4A8 694 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 SCN5AQ14524 2016 aa9.44□□□□□ -0.9
CLTCL1-204ENST00000458188 SMIM28A0A1B0GU29 152 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 LCHNA4D1U4 455 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 PTGESO14684 152 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 DGKIO75912 1065 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 EOMESO95936 686 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 LDHAP00338 332 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 NFICP08651 508 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 TRIM49P0CI25 452 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 TRIM49CP0CI26 452 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 DLATP10515 647 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 SKIP12755 728 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 IGFBP6P24592 240 aaPredicted RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 PSMC2P35998 433 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 PBX2P40425 430 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 PBX3P40426 434 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 SNRPFP62306 86 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 CYP24A1Q07973 514 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 NCAPHQ15003 741 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 CCDC40Q4G0X9 1142 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 RASIP1Q5U651 963 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 SPATA1Q5VX52 437 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 JADE1Q6IE81 842 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 LUZP1Q86V48 1076 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 GAS2L3Q86XJ1 694 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 ZNF280BQ86YH2 543 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 SLC9A9Q8IVB4 645 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 HERC6Q8IVU3 1022 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 DHX40Q8IX18 779 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 FAM186BQ8IYM0 893 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 HACE1Q8IYU2 909 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 ABI1Q8IZP0 508 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 GSTCDQ8NEC7 633 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 ENOX1Q8TC92 643 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 ELMO3Q96BJ8 720 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 KIF12Q96FN5 646 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 SNX27Q96L92 541 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 ELAC1Q9H777 363 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 GOLGA2P5Q9HBQ8 144 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.43□□□□□ -0.99e-9■■■■■ 111.8
CLTCL1-204ENST00000458188 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 FRMD4BQ9Y2L6 1034 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 GIT1Q9Y2X7 761 aa9.43□□□□□ -0.9
CLTCL1-204ENST00000458188 SIP14410 1827 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 PTPRJQ12913 1337 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 TTC26A0AVF1 554 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 TLL1O43897 1013 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 B4GALT3O60512 393 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 EFCAB14O75071 495 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 DDHD2O94830 711 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 ARHGEF15O94989 841 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 GJB5O95377 273 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 EPB41P11171 864 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 TNNI1P19237 187 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 ZNF445P59923 1031 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 SMAD3P84022 425 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 TFAMQ00059 246 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 PPP2R3AQ06190 1150 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 SOX4Q06945 474 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 BTG3Q14201 252 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 IQCB1Q15051 598 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 NFIL3Q16649 462 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 DCAF17Q5H9S7 520 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 NOMO2Q5JPE7 1267 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 TCERG1LQ5VWI1 586 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 GLB1LQ6UWU2 654 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms