RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SLC39A11Q8N1S5 342 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 SPPL3Q8TCT6 385 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 SNX27Q96L92 541 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 ALG13Q9NP73 1137 aaKnown RBP30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 SPG21Q9NZD8 308 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 LMCD1Q9NZU5 365 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 HOOK1Q9UJC3 728 aaKnown RBP30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 AGO2Q9UKV8 859 aaKnown RBP30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 ANK1P16157 1881 aa30.53■■■□□ 2.48
SMARCC1-203ENST00000454240 ALDH2P05091 517 aa30.52■■■□□ 2.48
SMARCC1-203ENST00000454240 FOSL2P15408 326 aa30.52■■■□□ 2.48
SMARCC1-203ENST00000454240 SLC11A1P49279 550 aa30.52■■■□□ 2.48
SMARCC1-203ENST00000454240 PLCB3Q01970 1234 aa30.52■■■□□ 2.48
SMARCC1-203ENST00000454240 SPATA20Q8TB22 786 aa30.52■■■□□ 2.48
SMARCC1-203ENST00000454240 CNTN3Q9P232 1028 aa30.52■■■□□ 2.48
SMARCC1-203ENST00000454240 CPSF3Q9UKF6 684 aaKnown RBP30.52■■■□□ 2.48
SMARCC1-203ENST00000454240 MTCH2Q9Y6C9 303 aa30.52■■■□□ 2.48
SMARCC1-203ENST00000454240 NT5C1B-RDH14C9J2C7 533 aa30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 TGFB1I1O43294 461 aa30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 IGFBP4P22692 258 aa30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 NELFCDQ8IXH7 590 aa30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 PPP1R10Q96QC0 940 aaKnown RBP30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 LMAN2LQ9H0V9 348 aa30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 PLEKHA5Q9HAU0 1116 aa30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 LMBRD1Q9NUN5 540 aa30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 STXBP5LQ9Y2K9 1186 aa30.51■■■□□ 2.47
SMARCC1-203ENST00000454240 SMIM28A0A1B0GU29 152 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 NRP1O14786 923 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 ADRB2P07550 413 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 CXCL8P10145 99 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 KCNE1P15382 129 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 TUSC3Q13454 348 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 ZMAT2Q96NC0 199 aaKnown RBP30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 GSDMAQ96QA5 445 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 FAN1Q9Y2M0 1017 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 PCDHA5Q9Y5H7 936 aa30.5■■■□□ 2.47
SMARCC1-203ENST00000454240 TTC26A0AVF1 554 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 DNAJB1P25685 340 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 ACOT2P49753 483 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 SNRPFP62306 86 aaKnown RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 POU5F1Q01860 360 aaKnown RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 UBE3AQ05086 875 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 CAMK1Q14012 370 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 ENOX2Q16206 610 aaKnown RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 KNOP1Q1ED39 458 aaKnown RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 GLRA4Q5JXX5 417 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 CRELD2Q6UXH1 353 aaPredicted RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 TMEM173Q86WV6 379 aaPredicted RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 POF1BQ8WVV4 589 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 MRPL38Q96DV4 380 aaKnown RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 IGSF21Q96ID5 467 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 CBWD1Q9BRT8 395 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 RPF1Q9H9Y2 349 aaKnown RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 LZTS1Q9Y250 596 aa30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 PRRC2BQ5JSZ5 2229 aaKnown RBP30.49■■■□□ 2.47
SMARCC1-203ENST00000454240 SMC2O95347 1197 aa30.48■■■□□ 2.47
SMARCC1-203ENST00000454240 OR1G1P47890 313 aa30.48■■■□□ 2.47
SMARCC1-203ENST00000454240 PTPROQ16827 1216 aa30.48■■■□□ 2.47
SMARCC1-203ENST00000454240 ARMCX5Q6P1M9 558 aa30.48■■■□□ 2.47
SMARCC1-203ENST00000454240 ERCC4Q92889 916 aaPredicted RBP30.48■■■□□ 2.47
SMARCC1-203ENST00000454240 LDHAP00338 332 aaKnown RBP30.47■■■□□ 2.47
SMARCC1-203ENST00000454240 KRT17Q04695 432 aa30.47■■■□□ 2.47
SMARCC1-203ENST00000454240 ZSWIM2Q8NEG5 633 aa30.47■■■□□ 2.47
SMARCC1-203ENST00000454240 BCL7CQ8WUZ0 217 aaPredicted RBP30.47■■■□□ 2.47
SMARCC1-203ENST00000454240 SMARCE1Q969G3 411 aa30.47■■■□□ 2.47
SMARCC1-203ENST00000454240 AGPAT3Q9NRZ7 376 aa30.47■■■□□ 2.47
SMARCC1-203ENST00000454240 RMND1Q9NWS8 449 aa30.47■■■□□ 2.47
SMARCC1-203ENST00000454240 LACTBL1A8MY62 500 aa30.46■■■□□ 2.47
SMARCC1-203ENST00000454240 KIAA0391O15091 583 aaKnown RBP30.46■■■□□ 2.47
SMARCC1-203ENST00000454240 TMEM169Q96HH4 297 aa30.46■■■□□ 2.47
SMARCC1-203ENST00000454240 PCIF1Q9H4Z3 704 aa30.46■■■□□ 2.47
SMARCC1-203ENST00000454240 CGNQ9P2M7 1197 aaKnown RBP30.46■■■□□ 2.47
SMARCC1-203ENST00000454240 PUF60Q9UHX1 559 aaKnown RBP30.46■■■□□ 2.47
SMARCC1-203ENST00000454240 PPP2R3AQ06190 1150 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 HS2ST1Q7LGA3 356 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 CD302Q8IX05 232 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 SAAL1Q96ER3 474 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 TSPAN18Q96SJ8 248 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 PAAF1Q9BRP4 392 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 FAM213AQ9BRX8 229 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 KCTD10Q9H3F6 313 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 SLC38A7Q9NVC3 462 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 MARCH5Q9NX47 278 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 CACNG4Q9UBN1 327 aa30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 PRG3Q9Y2Y8 225 aaPredicted RBP30.45■■■□□ 2.47
SMARCC1-203ENST00000454240 EYSQ5T1H1 3165 aa30.44■■■□□ 2.46
SMARCC1-203ENST00000454240 EXTL3O43909 919 aa30.44■■■□□ 2.46
SMARCC1-203ENST00000454240 SOX4Q06945 474 aaPredicted RBP30.44■■■□□ 2.46
SMARCC1-203ENST00000454240 C12orf56Q8IXR9 622 aa30.44■■■□□ 2.46
SMARCC1-203ENST00000454240 GUF1Q8N442 669 aaKnown RBP30.44■■■□□ 2.46
SMARCC1-203ENST00000454240 COLEC11Q9BWP8 271 aa30.44■■■□□ 2.46
SMARCC1-203ENST00000454240 MYO7AQ13402 2215 aa30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 REV3LO60673 3130 aa30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 CASTOR2A6NHX0 329 aa30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 KIF20AO95235 890 aa30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 ZBTB6Q15916 424 aa30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 ZNF658Q5TYW1 1059 aaPredicted RBP30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 DDX53Q86TM3 631 aaKnown RBP30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 GPD1LQ8N335 351 aa30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 ASB7Q9H672 318 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms