RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 MAPK4P31152 587 aa12.11□□□□□ -0.47
SYVN1-204ENST00000449943 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
SYVN1-204ENST00000449943 ART4Q93070 314 aa12.11□□□□□ -0.47
SYVN1-204ENST00000449943 TBC1D31Q96DN5 1066 aa12.11□□□□□ -0.47
SYVN1-204ENST00000449943 MYCBPQ99417 103 aaPredicted RBP12.11□□□□□ -0.47
SYVN1-204ENST00000449943 CHST7Q9NS84 486 aa12.11□□□□□ -0.47
SYVN1-204ENST00000449943 PCDHA3Q9Y5H8 950 aa12.11□□□□□ -0.47
SYVN1-204ENST00000449943 LOC102724159A0A0B4J2E5 919 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 MUTP22033 750 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 GBP1P32455 592 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 SPP2Q13103 211 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 PWP2Q15269 919 aaKnown RBP12.1□□□□□ -0.47
SYVN1-204ENST00000449943 TBC1D1Q86TI0 1168 aaPredicted RBP12.1□□□□□ -0.47
SYVN1-204ENST00000449943 NT5C1BQ96P26 610 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
SYVN1-204ENST00000449943 SORBS3O60504 671 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 CLTAP09496 248 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 MTMR1Q13613 665 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 PRKG1Q13976 671 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 LMBRD2Q68DH5 695 aaPredicted RBP12.1□□□□□ -0.47
SYVN1-204ENST00000449943 ARHGEF2Q92974 986 aaKnown RBP12.1□□□□□ -0.47
SYVN1-204ENST00000449943 CD101Q93033 1021 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 TMEM39BQ9GZU3 492 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 NSRP1Q9H0G5 558 aaKnown RBP12.1□□□□□ -0.47
SYVN1-204ENST00000449943 ABCF3Q9NUQ8 709 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 CNOT7Q9UIV1 285 aaKnown RBP12.1□□□□□ -0.47
SYVN1-204ENST00000449943 ATRNL1Q5VV63 1379 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 P4HA2O15460 535 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 DGKZQ13574 1117 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 MYBPC2Q14324 1141 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 KRT39Q6A163 491 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 EXOC3L1Q86VI1 746 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 FGFR1OP2Q9NVK5 253 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 GTF3C4Q9UKN8 822 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 TCP11X1B4DZS4 312 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 GZMAP12544 262 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 SIX1Q15475 284 aaPredicted RBP12.1□□□□□ -0.47
SYVN1-204ENST00000449943 CNGA2Q16280 664 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 B3GNT9Q6UX72 402 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 CCDC63Q8NA47 563 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 GIMAP7Q8NHV1 300 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 CPA5Q8WXQ8 436 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 EXOC7Q9UPT5 735 aa12.1□□□□□ -0.47
SYVN1-204ENST00000449943 NRXN2Q9P2S2 1712 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 TMEM120BA0PK00 339 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 CYP1A2P05177 515 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 ADCY8P40145 1251 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 CDR2Q01850 454 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 KYNUQ16719 465 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 LACTB2Q53H82 288 aaPredicted RBP12.09□□□□□ -0.47
SYVN1-204ENST00000449943 DPY19L2Q6NUT2 758 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 SEPT14Q6ZU15 432 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 RUNDC3BQ96NL0 473 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 DENND3A2RUS2 1198 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
SYVN1-204ENST00000449943 ADSSP30520 456 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 ALCAMQ13740 583 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 POMGNT1Q8WZA1 660 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 SHC3Q92529 594 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 KIFAP3Q92845 792 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 VTI1AQ96AJ9 217 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 PLVAPQ9BX97 442 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 RAVER2Q9HCJ3 691 aaKnown RBP12.09□□□□□ -0.47
SYVN1-204ENST00000449943 AGO4Q9HCK5 861 aaKnown RBP12.09□□□□□ -0.47
SYVN1-204ENST00000449943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.09□□□□□ -0.472e-6■■□□□ 13.6
SYVN1-204ENST00000449943 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
SYVN1-204ENST00000449943 ANKRD31Q8N7Z5 1873 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 TESPA1A2RU30 521 aaPredicted RBP12.09□□□□□ -0.47
SYVN1-204ENST00000449943 THAP12O43422 761 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 YY1AP1Q9H869 796 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 HOMER3Q9NSC5 361 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 USTQ9Y2C2 406 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 YDJCA8MPS7 323 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 ASAP2O43150 1006 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 ITGA8P53708 1063 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 NUGGCQ68CJ6 796 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 TRPM8Q7Z2W7 1104 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 FAM160B2Q86V87 743 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 KCNG1Q9UIX4 513 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 USP20Q9Y2K6 914 aa12.09□□□□□ -0.47
SYVN1-204ENST00000449943 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 DHX15O43143 795 aaKnown RBP12.08□□□□□ -0.48
SYVN1-204ENST00000449943 CNGA1P29973 690 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 GTF2BQ00403 316 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 CROCCP2Q86T23 111 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 PRUNE1Q86TP1 453 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 FAM228AQ86W67 206 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 PASD1Q8IV76 773 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 HELQQ8TDG4 1101 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 MORC4Q8TE76 937 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 ZNF341Q9BYN7 854 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 RAB20Q9NX57 234 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 UVRAGQ9P2Y5 699 aa12.08□□□□□ -0.48
SYVN1-204ENST00000449943 ZNF70Q9UC06 446 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms