RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 PLS3P13797 630 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 MTIF2P46199 727 aaKnown RBP6.4□□□□□ -1.39
PROM1-201ENST00000447510 CKAP4Q07065 602 aaKnown RBP6.4□□□□□ -1.39
PROM1-201ENST00000447510 TWF2Q6IBS0 349 aaKnown RBP6.4□□□□□ -1.39
PROM1-201ENST00000447510 ZBTB33Q86T24 672 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 HACE1Q8IYU2 909 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 RPUSD2Q8IZ73 545 aaKnown RBP6.4□□□□□ -1.39
PROM1-201ENST00000447510 MLKLQ8NB16 471 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 RDH13Q8NBN7 331 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 ZNF473Q8WTR7 871 aaKnown RBP6.4□□□□□ -1.39
PROM1-201ENST00000447510 POMGNT1Q8WZA1 660 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 ZNF333Q96JL9 665 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 PCYT2Q99447 389 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 OSMRQ99650 979 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 BPIFA3Q9BQP9 254 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 C16orf70Q9BSU1 422 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 KIFC3Q9BVG8 833 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 MMRN2Q9H8L6 949 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 TRMT13Q9NUP7 481 aaKnown RBP6.4□□□□□ -1.39
PROM1-201ENST00000447510 WRAP73Q9P2S5 460 aaPredicted RBP6.4□□□□□ -1.39
PROM1-201ENST00000447510 SEL1LQ9UBV2 794 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 MAN1B1Q9UKM7 699 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 TPX2Q9ULW0 747 aaKnown RBP6.4□□□□□ -1.39
PROM1-201ENST00000447510 PPME1Q9Y570 386 aa6.4□□□□□ -1.39
PROM1-201ENST00000447510 A0A087WZ62 844 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 ZBBXA8MT70 800 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 MAFO75444 373 aaPredicted RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 CSDE1O75534 798 aaKnown RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 KRT13P13646 458 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 LSP1P33241 339 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 CYP2J2P51589 502 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 LAMTOR4Q0VGL1 99 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 MAP3K21Q5TCX8 1036 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 KSR1Q8IVT5 923 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 ZNF483Q8TF39 744 aaPredicted RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 RNPC3Q96LT9 517 aaKnown RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 CCT8L2Q96SF2 557 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 FDXACB1Q9BRP7 624 aaPredicted RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 HTATIP2Q9BUP3 242 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 TRPV6Q9H1D0 765 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 KBTBD4Q9NVX7 518 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 SMARCAL1Q9NZC9 954 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 GDAQ9Y2T3 454 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 MROH7Q68CQ1 1323 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 IGSF9BQ9UPX0 1349 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 ESYT3A0FGR9 886 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 ARVCFO00192 962 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 CETN3O15182 167 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 SLC8A1P32418 973 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 EFNA5P52803 228 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 SLC12A3P55017 1021 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 TLE2Q04725 743 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 PAK1Q13153 545 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 GIT2Q14161 759 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 NELFBQ8WX92 580 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 STAMBPL1Q96FJ0 436 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 EEF2KMTQ96G04 330 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 PAIP2Q9BPZ3 127 aaKnown RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 TAB2Q9NYJ8 693 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 FRMD4BQ9Y2L6 1034 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 L3MBTL1Q9Y468 752 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 ADAMTS4O75173 837 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 PRKCBP05771 671 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 CCL23P55773 120 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 RWDD2BP57060 319 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 OSTNP61366 133 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 PRPF4BQ13523 1007 aaKnown RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 TUBB2AQ13885 445 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 NAALADL2Q58DX5 795 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 HYIQ5T013 277 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 ZNF658Q5TYW1 1059 aaPredicted RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 IQCEQ6IPM2 695 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 TBC1D1Q86TI0 1168 aaPredicted RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 NLRP14Q86W24 1093 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 CNGA4Q8IV77 575 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 TRIML1Q8N9V2 468 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 TUBB2BQ9BVA1 445 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 NIFKQ9BYG3 293 aaKnown RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 PCIF1Q9H4Z3 704 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 TMEM206Q9H813 350 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 VIPAS39Q9H9C1 493 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 LRFN2Q9ULH4 789 aa6.39□□□□□ -1.39
PROM1-201ENST00000447510 PIN4Q9Y237 131 aaKnown RBP6.39□□□□□ -1.39
PROM1-201ENST00000447510 CLIC2O15247 247 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 EVI5O60447 810 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 SMIM24O75264 130 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 RPLP2P05387 115 aaKnown RBP6.38□□□□□ -1.39
PROM1-201ENST00000447510 GHRP10912 638 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 NR1D1P20393 614 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 ABCD1P33897 745 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 NPTX2P47972 431 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 FXR1P51114 621 aaKnown RBP eCLIP6.38□□□□□ -1.39
PROM1-201ENST00000447510 ALCAMQ13740 583 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 KCTD19Q17RG1 926 aaPredicted RBP6.38□□□□□ -1.39
PROM1-201ENST00000447510 C1orf186Q6ZWK4 172 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 DEFB128Q7Z7B8 93 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 USP37Q86T82 979 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 CSGALNACT2Q8N6G5 542 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 FNBP1Q96RU3 617 aa6.38□□□□□ -1.39
PROM1-201ENST00000447510 HSD3B7Q9H2F3 369 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms