RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ALCAMQ13740 583 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 TCEAL5Q5H9L2 206 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 CNNM4Q6P4Q7 775 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 STXBP4Q6ZWJ1 553 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 NELFCDQ8IXH7 590 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 HASPINQ8TF76 798 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 POMGNT1Q8WZA1 660 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 IGSF21Q96ID5 467 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 PAAF1Q9BRP4 392 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 TMEM175Q9BSA9 504 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 STRA6Q9BX79 667 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 NSUN3Q9H649 340 aaKnown RBP13.01□□□□□ -0.33
RFC4-208ENST00000447345 GOLGA2P5Q9HBQ8 144 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 SLC39A2Q9NP94 309 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 MARCH5Q9NX47 278 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 LMCD1Q9NZU5 365 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 FAN1Q9Y2M0 1017 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
RFC4-208ENST00000447345 A0A0B4J269 797 aa13□□□□□ -0.33
RFC4-208ENST00000447345 OGTO15294 1046 aa13□□□□□ -0.33
RFC4-208ENST00000447345 KLRC4O43908 158 aa13□□□□□ -0.33
RFC4-208ENST00000447345 NR1I2O75469 434 aa13□□□□□ -0.33
RFC4-208ENST00000447345 RPN1P04843 607 aaKnown RBP13□□□□□ -0.33
RFC4-208ENST00000447345 ALDH2P05091 517 aa13□□□□□ -0.33
RFC4-208ENST00000447345 ACOT2P49753 483 aa13□□□□□ -0.33
RFC4-208ENST00000447345 PLCB3Q01970 1234 aa13□□□□□ -0.33
RFC4-208ENST00000447345 UBE3AQ05086 875 aa13□□□□□ -0.33
RFC4-208ENST00000447345 FAM160A1Q05DH4 1040 aa13□□□□□ -0.33
RFC4-208ENST00000447345 TUSC3Q13454 348 aa13□□□□□ -0.33
RFC4-208ENST00000447345 KMT5BQ4FZB7 885 aa13□□□□□ -0.33
RFC4-208ENST00000447345 EP400NLQ6ZTU2 488 aa13□□□□□ -0.33
RFC4-208ENST00000447345 ADGRD2Q7Z7M1 963 aa13□□□□□ -0.33
RFC4-208ENST00000447345 RBM23Q86U06 439 aaKnown RBP13□□□□□ -0.33
RFC4-208ENST00000447345 FMR1NBQ8N0W7 255 aaPredicted RBP13□□□□□ -0.33
RFC4-208ENST00000447345 FAM212AQ96EL1 285 aa13□□□□□ -0.33
RFC4-208ENST00000447345 SAAL1Q96ER3 474 aa13□□□□□ -0.33
RFC4-208ENST00000447345 ZMAT2Q96NC0 199 aaKnown RBP13□□□□□ -0.33
RFC4-208ENST00000447345 IPO9Q96P70 1041 aaKnown RBP13□□□□□ -0.33
RFC4-208ENST00000447345 VN1R3Q9BXE9 311 aa13□□□□□ -0.33
RFC4-208ENST00000447345 PUF60Q9UHX1 559 aaKnown RBP13□□□□□ -0.33
RFC4-208ENST00000447345 TCF20Q9UGU0 1960 aaKnown RBP13□□□□□ -0.33
RFC4-208ENST00000447345 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 PVALEFA0A1B0GWK0 134 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 FAM189A1O60320 539 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 KIF4AO95239 1232 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 CLTAP09496 248 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 GTF2F1P35269 517 aaKnown RBP eCLIP12.99□□□□□ -0.33
RFC4-208ENST00000447345 PPP2R3AQ06190 1150 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 SOX4Q06945 474 aaPredicted RBP12.99□□□□□ -0.33
RFC4-208ENST00000447345 EHHADHQ08426 723 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 PNOCQ13519 176 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 HSP90AA2PQ14568 343 aaPredicted RBP12.99□□□□□ -0.33
RFC4-208ENST00000447345 NAB2Q15742 525 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 ENOX2Q16206 610 aaKnown RBP12.99□□□□□ -0.33
RFC4-208ENST00000447345 SLC10A6Q3KNW5 377 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 SLFN12LQ6IEE8 588 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 EPM2AIP1Q7L775 607 aaPredicted RBP12.99□□□□□ -0.33
RFC4-208ENST00000447345 TMC7Q7Z402 723 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 VPS52Q8N1B4 723 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 TMEM130Q8N3G9 435 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 AUTS2Q8WXX7 1259 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 C18orf25Q96B23 403 aaPredicted RBP12.99□□□□□ -0.33
RFC4-208ENST00000447345 PPP1R10Q96QC0 940 aaKnown RBP12.99□□□□□ -0.33
RFC4-208ENST00000447345 CBWD1Q9BRT8 395 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 PCIF1Q9H4Z3 704 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 TMEM206Q9H813 350 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 RPF1Q9H9Y2 349 aaKnown RBP12.99□□□□□ -0.33
RFC4-208ENST00000447345 CNTN3Q9P232 1028 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 TUBGCP4Q9UGJ1 667 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 AGO2Q9UKV8 859 aaKnown RBP12.99□□□□□ -0.33
RFC4-208ENST00000447345 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 SCN1AP35498 2009 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 TSC2P49815 1807 aa12.99□□□□□ -0.33
RFC4-208ENST00000447345 UBE4BO95155 1302 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 GOLGA8IPA6NC78 632 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 GOLGA8JA6NMD2 632 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 EIF3DO15371 548 aaKnown RBP eCLIP12.98□□□□□ -0.33
RFC4-208ENST00000447345 ADSSP30520 456 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 HOXD13P35453 343 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 NRIP1P48552 1158 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 CLCNKBP51801 687 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 DPYDQ12882 1025 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 SNW1Q13573 536 aaKnown RBP12.98□□□□□ -0.33
RFC4-208ENST00000447345 POSTNQ15063 836 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 ARMCX5Q6P1M9 558 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 KIAA0895Q8NCT3 520 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 ZSWIM2Q8NEG5 633 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 ENGASEQ8NFI3 743 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 SCFD1Q8WVM8 642 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 ERCC4Q92889 916 aaPredicted RBP12.98□□□□□ -0.33
RFC4-208ENST00000447345 KIF12Q96FN5 646 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 B3GALT6Q96L58 329 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 FAM213AQ9BRX8 229 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 COLEC11Q9BWP8 271 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 ZBP1Q9H171 429 aa12.98□□□□□ -0.33
RFC4-208ENST00000447345 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
RFC4-208ENST00000447345 UNC80Q8N2C7 3258 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms