RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 EMC2Q15006 297 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 CLEC16AQ2KHT3 1053 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 CPNE8Q86YQ8 564 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 EFCAB13Q8IY85 973 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 ZNF516Q92618 1163 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 C18orf8Q96DM3 657 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 RASAL2Q9UJF2 1139 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 PCDHA3Q9Y5H8 950 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 PTPRFP10586 1907 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 MYPNQ86TC9 1320 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 ZNF541Q9H0D2 1346 aa19.13■□□□□ 0.65
CLDN9-201ENST00000445369 KIAA0391O15091 583 aaKnown RBP19.12■□□□□ 0.65
CLDN9-201ENST00000445369 SORBS3O60504 671 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 PYGMP11217 842 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 SP2Q02086 613 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 PSMD6Q15008 389 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 FAM81BQ96LP2 452 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 KIAA1586Q9HCI6 787 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 STYXL1Q9Y6J8 313 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 A0A0G2JMZ2 1700 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 SPOPO43791 374 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 ZEB2O60315 1214 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 KRT5P13647 590 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 ATP4AP20648 1035 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 ICAM3P32942 547 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 CCT5P48643 541 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 LIG4P49917 911 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 BIRC3Q13489 604 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 R3HDM1Q15032 1099 aaKnown RBP19.12■□□□□ 0.65
CLDN9-201ENST00000445369 CYP1B1Q16678 543 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 NOL9Q5SY16 702 aaKnown RBP19.12■□□□□ 0.65
CLDN9-201ENST00000445369 RUFY4Q6ZNE9 571 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 ZNF526Q8TF50 670 aaPredicted RBP19.12■□□□□ 0.65
CLDN9-201ENST00000445369 FAM84AQ96KN4 292 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 C1orf112Q9NSG2 853 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 KCNG1Q9UIX4 513 aa19.12■□□□□ 0.65
CLDN9-201ENST00000445369 MAFBQ9Y5Q3 323 aaPredicted RBP19.12■□□□□ 0.65
CLDN9-201ENST00000445369 ATG7O95352 703 aa19.11■□□□□ 0.65
CLDN9-201ENST00000445369 LSP1P33241 339 aa19.11■□□□□ 0.65
CLDN9-201ENST00000445369 POLGP54098 1239 aaPredicted RBP19.11■□□□□ 0.65
CLDN9-201ENST00000445369 AGBL2Q5U5Z8 902 aa19.11■□□□□ 0.65
CLDN9-201ENST00000445369 TTC27Q6P3X3 843 aa19.11■□□□□ 0.65
CLDN9-201ENST00000445369 ZDHHC24Q6UX98 284 aa19.11■□□□□ 0.65
CLDN9-201ENST00000445369 SLC13A5Q86YT5 568 aaPredicted RBP19.11■□□□□ 0.65
CLDN9-201ENST00000445369 TRPM4Q8TD43 1214 aa19.11■□□□□ 0.65
CLDN9-201ENST00000445369 PSPC1Q8WXF1 523 aaKnown RBP19.11■□□□□ 0.65
CLDN9-201ENST00000445369 HOXC10Q9NYD6 342 aa19.11■□□□□ 0.65
CLDN9-201ENST00000445369 CNOT8Q9UFF9 292 aaKnown RBP19.11■□□□□ 0.65
CLDN9-201ENST00000445369 AFG3L2Q9Y4W6 797 aa19.11■□□□□ 0.65
CLDN9-201ENST00000445369 UNGP13051 313 aaPredicted RBP19.1■□□□□ 0.65
CLDN9-201ENST00000445369 WNT7BP56706 349 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 IRX5P78411 483 aaPredicted RBP19.1■□□□□ 0.65
CLDN9-201ENST00000445369 GUCY1A3Q02108 690 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 SIX1Q15475 284 aaPredicted RBP19.1■□□□□ 0.65
CLDN9-201ENST00000445369 ZACNQ401N2 412 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 MAGOHBQ96A72 148 aaKnown RBP19.1■□□□□ 0.65
CLDN9-201ENST00000445369 DHX33Q9H6R0 707 aaKnown RBP19.1■□□□□ 0.65
CLDN9-201ENST00000445369 GRHL1Q9NZI5 618 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 PIGRP01833 764 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 OATP04181 439 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 MDH1P40925 334 aaKnown RBP19.1■□□□□ 0.65
CLDN9-201ENST00000445369 NLRP11P59045 1033 aaKnown RBP19.1■□□□□ 0.65
CLDN9-201ENST00000445369 CYFIP1Q7L576 1253 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 ARFGAP2Q8N6H7 521 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 DNERQ8NFT8 737 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 ASAP3Q8TDY4 903 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 PORCNQ9H237 461 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 RABEP2Q9H5N1 569 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 ZNF302Q9NR11 478 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 ATP8A1Q9Y2Q0 1164 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 SNX24Q9Y343 169 aa19.1■□□□□ 0.65
CLDN9-201ENST00000445369 TCRBV7S2A1N4TA0A589 114 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 PODXLO00592 558 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 CALCAP01258 141 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 C4BPAP04003 597 aaKnown RBP19.09■□□□□ 0.65
CLDN9-201ENST00000445369 SCP2P22307 547 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 RWDD2BP57060 319 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 STRN3Q13033 797 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 STXBP2Q15833 593 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 LMBRD2Q68DH5 695 aaPredicted RBP19.09■□□□□ 0.65
CLDN9-201ENST00000445369 CCDC137Q6PK04 289 aaKnown RBP19.09■□□□□ 0.65
CLDN9-201ENST00000445369 ZNF677Q86XU0 584 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 TMEM143Q96AN5 459 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 HAPLN2Q9GZV7 340 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 EPB41L4BQ9H329 900 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 CENPHQ9H3R5 247 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 GGA3Q9NZ52 723 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 FEZ2Q9UHY8 353 aaPredicted RBP19.09■□□□□ 0.65
CLDN9-201ENST00000445369 TRIM66O15016 1216 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 ERLIN2O94905 339 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 HLA-DRAP01903 254 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 GLRA2P23416 452 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 NAMPTP43490 491 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 SKIDA1Q1XH10 827 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 SH3D19Q5HYK7 790 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 TDRD10Q5VZ19 366 aaKnown RBP19.09■□□□□ 0.65
CLDN9-201ENST00000445369 CRELD2Q6UXH1 353 aaPredicted RBP19.09■□□□□ 0.65
CLDN9-201ENST00000445369 C12orf50Q8NA57 414 aaPredicted RBP19.09■□□□□ 0.65
CLDN9-201ENST00000445369 CHST13Q8NET6 341 aa19.09■□□□□ 0.65
CLDN9-201ENST00000445369 FBXO25Q8TCJ0 367 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms