RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 PRDM12Q9H4Q4 367 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 PCIF1Q9H4Z3 704 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 CWH43Q9H720 699 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 NRDE2Q9H7Z3 1164 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 AGPAT3Q9NRZ7 376 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 R3HCC1Q9Y3T6 440 aaKnown RBP15.34■□□□□ 0.05
SSBP3-208ENST00000444533 LAMA3Q16787 3333 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 FNDC1Q4ZHG4 1894 aaPredicted RBP15.33■□□□□ 0.05
SSBP3-208ENST00000444533 H3BNC9 293 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 PDXKO00764 312 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 EXOC3O60645 756 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 LPXNO60711 386 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 IGFBP4P22692 258 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 MCM4P33991 863 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 CYP2J2P51589 502 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 UBE3AQ05086 875 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 GRIN2CQ14957 1233 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 SURF1Q15526 300 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 LRRC55Q6ZSA7 311 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 Q7L0L9 218 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 USP37Q86T82 979 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 XXYLT1Q8NBI6 393 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 SPATA20Q8TB22 786 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-208ENST00000444533 PPP2R3CQ969Q6 453 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 SAAL1Q96ER3 474 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 KIF12Q96FN5 646 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 DDX27Q96GQ7 796 aaKnown RBP15.33■□□□□ 0.04
SSBP3-208ENST00000444533 CBWD1Q9BRT8 395 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 LMAN2LQ9H0V9 348 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 ASB7Q9H672 318 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 RBAKQ9NYW8 714 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-208ENST00000444533 HSPBP1Q9NZL4 362 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 CNTN3Q9P232 1028 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 KIAA1468Q9P260 1216 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 CPSF3Q9UKF6 684 aaKnown RBP15.33■□□□□ 0.04
SSBP3-208ENST00000444533 MAPK8IP1Q9UQF2 711 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 FRMD4BQ9Y2L6 1034 aa15.33■□□□□ 0.04
SSBP3-208ENST00000444533 SMIM28A0A1B0GU29 152 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 TISP43B9A030 160 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 CLIC2O15247 247 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 FGF18O76093 207 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 ARHGEF15O94989 841 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 KCNE1P15382 129 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 ADSSP30520 456 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 GLRA4Q5JXX5 417 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 ZNF280BQ86YH2 543 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 KLHL23Q8NBE8 558 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 BEST2Q8NFU1 509 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 CACTINQ8WUQ7 758 aaKnown RBP15.32■□□□□ 0.04
SSBP3-208ENST00000444533 HAPLN2Q9GZV7 340 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 MAN1B1Q9UKM7 699 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 UBQLN1Q9UMX0 589 aaKnown RBP15.32■□□□□ 0.04
SSBP3-208ENST00000444533 DERAQ9Y315 318 aa15.32■□□□□ 0.04
SSBP3-208ENST00000444533 TTC26A0AVF1 554 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 GOLGA8IPA6NC78 632 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 GOLGA8JA6NMD2 632 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 BIN1O00499 593 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 TGFB1I1O43294 461 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 TADA2AO75478 443 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 DDHD2O94830 711 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 GALTP07902 379 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 FOSL2P15408 326 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 TNFSF9P41273 254 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 AFF1P51825 1210 aaKnown RBP15.31■□□□□ 0.04
SSBP3-208ENST00000444533 MYBPC2Q14324 1141 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 TMEM132DQ14C87 1099 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 ENOX2Q16206 610 aaKnown RBP15.31■□□□□ 0.04
SSBP3-208ENST00000444533 SLC10A6Q3KNW5 377 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 COBLL1Q53SF7 1204 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 ALKAL1Q6UXT8 129 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 COLGALT2Q8IYK4 626 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 MICAL1Q8TDZ2 1067 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 GDPD5Q8WTR4 605 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 FNBP1Q96RU3 617 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 MIOSQ9NXC5 875 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 MTMR10Q9NXD2 777 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 LMCD1Q9NZU5 365 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 DNAJB4Q9UDY4 337 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 DACH1Q9UI36 760 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 PLAGL2Q9UPG8 496 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 LZTS1Q9Y250 596 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 PRG3Q9Y2Y8 225 aaPredicted RBP15.31■□□□□ 0.04
SSBP3-208ENST00000444533 LAMA2P24043 3122 aaKnown RBP15.31■□□□□ 0.04
SSBP3-208ENST00000444533 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
SSBP3-208ENST00000444533 BICDL2A1A5D9 508 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 CASTOR2A6NHX0 329 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 LACTBL1A8MY62 500 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 NT5C1B-RDH14C9J2C7 533 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 PTGESO14684 152 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 NRP1O14786 923 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 TRAPPC3O43617 180 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 NR3C1P04150 777 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 RPL9P32969 192 aaKnown RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 CA8P35219 290 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 HOXD13P35453 343 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms